RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CCDC138Q96M89 665 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 ACAT2Q9BWD1 397 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 ACTL8Q9H568 366 aa23.88■■□□□ 1.41
PMS1-220ENST00000618056 ESYT3A0FGR9 886 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 OR2A25A4D2G3 310 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 EIF4E1BA6NMX2 242 aaKnown RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 CTSVO60911 334 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 PRKAR1AP10644 381 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 GPX6P59796 221 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 PRDX1Q06830 199 aaKnown RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 TCTE1Q5JU00 501 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 ICE2Q659A1 982 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 LCN10Q6JVE6 187 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 C3orf62Q6ZUJ4 267 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 ZNF655Q8N720 491 aaPredicted RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 PPFIBP2Q8ND30 876 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 RUFY1Q96T51 708 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 DPH7Q9BTV6 452 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 NLNQ9BYT8 704 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 SLC6A20Q9NP91 592 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 MRPS30Q9NP92 439 aaKnown RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 TAC3Q9UHF0 121 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 FARSAQ9Y285 508 aaKnown RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 FASNP49327 2511 aaKnown RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 FAM95CA0A1B0GW59 222 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 FAM159BA6NKW6 160 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 SRPX2O60687 465 aaPredicted RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 CCNDBP1O95273 360 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 CAPN1P07384 714 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 ZNF37AP17032 561 aaPredicted RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 MAGEA4P43358 317 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 YBX1P67809 324 aaKnown RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 PTCHD3Q3KNS1 767 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 C16orf46Q6P387 395 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 FAM198BQ6UWH4 519 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 RNF44Q7L0R7 432 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 CCDC25Q86WR0 208 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 KIF18AQ8NI77 898 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 VPS39Q96JC1 886 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 GBP5Q96PP8 586 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 NDC1Q9BTX1 674 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 ZDHHC18Q9NUE0 388 aa23.87■■□□□ 1.41
PMS1-220ENST00000618056 STOX2Q9P2F5 926 aaPredicted RBP23.87■■□□□ 1.41
PMS1-220ENST00000618056 MED13Q9UHV7 2174 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 C1QAP02745 245 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 AGXTP21549 392 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 PGGT1BP53609 377 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 ABATP80404 500 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 LY6DQ14210 128 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 SYVN1Q86TM6 617 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 SELENOSQ9BQE4 189 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 PLCD4Q9BRC7 762 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 ARHGAP9Q9BRR9 750 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 IRAK4Q9NWZ3 460 aa23.86■■□□□ 1.41
PMS1-220ENST00000618056 IGKV1-8A0A0C4DH67 115 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 CTAGE15A4D2H0 777 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 CXorf49A8MYA2 514 aaPredicted RBP23.85■■□□□ 1.41
PMS1-220ENST00000618056 PIAS1O75925 651 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 CTAGE8P0CG41 777 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 ARSFP54793 590 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 TAS2R39P59534 338 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 GUCY2DQ02846 1103 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 TSTA3Q13630 321 aaPredicted RBP23.85■■□□□ 1.41
PMS1-220ENST00000618056 ERV3-1Q14264 604 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 PHKG1Q16816 387 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 ATP1A1-AS1Q5TC04 95 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 YOD1Q5VVQ6 348 aaPredicted RBP23.85■■□□□ 1.41
PMS1-220ENST00000618056 ZNF425Q6IV72 752 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 TMEM207Q6UWW9 146 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 CTAGE6Q86UF2 777 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 CTAGE4Q8IX94 777 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 EXD3Q8N9H8 876 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 NOA1Q8NC60 698 aaKnown RBP23.85■■□□□ 1.41
PMS1-220ENST00000618056 ANKRD7Q92527 254 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 MED8Q96G25 268 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 CPNE1Q99829 537 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 C17orf62Q9BQA9 187 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 FAM129AQ9BZQ8 928 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 POPDC3Q9HBV1 291 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 LRRC4CQ9HCJ2 640 aa23.85■■□□□ 1.41
PMS1-220ENST00000618056 FITM1A5D6W6 292 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 NRP2O60462 931 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 HIST1H2AGP0C0S8 130 aaPredicted RBP23.84■■□□□ 1.41
PMS1-220ENST00000618056 HIST1H2ADP20671 130 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 AP1S2P56377 157 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 RPS18P62269 152 aaKnown RBP23.84■■□□□ 1.41
PMS1-220ENST00000618056 RELAQ04206 551 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 GRM7Q14831 915 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 UGT8Q16880 541 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 PAQR7Q86WK9 346 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 NKAPQ8N5F7 415 aaKnown RBP23.84■■□□□ 1.41
PMS1-220ENST00000618056 ENDOVQ8N8Q3 282 aaKnown RBP23.84■■□□□ 1.41
PMS1-220ENST00000618056 HIST1H2AHQ96KK5 128 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 HIST1H2AJQ99878 128 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 ZFYVE21Q9BQ24 234 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 H2AFJQ9BTM1 129 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 DHRS4Q9BTZ2 278 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 CCDC177Q9NQR7 707 aaPredicted RBP23.84■■□□□ 1.41
PMS1-220ENST00000618056 TXLNGQ9NUQ3 528 aa23.84■■□□□ 1.41
PMS1-220ENST00000618056 UTP6Q9NYH9 597 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms