RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 SIGLEC6O43699 453 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 NUDT21O43809 227 aaKnown RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 UGDHO60701 494 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 LRP3O75074 770 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 TGDSO95455 350 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 CLDN9O95484 217 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 LMNAP02545 664 aaKnown RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 KITP10721 976 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 UROSP10746 265 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 MYF5P13349 255 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 GLB1P16278 677 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 POLR2CP19387 275 aaPredicted RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 SERPINB3P29508 390 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 CASP2P42575 452 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 FOXA1P55317 472 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 YBX1P67809 324 aaKnown RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 IRF8Q02556 426 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 PRDX1Q06830 199 aaKnown RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 SPEM2Q0P670 501 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 BIRC2Q13490 618 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 DOC2AQ14183 400 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 E2F2Q14209 437 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 KIR2DS3Q14952 304 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 NR1D2Q14995 579 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 SUZ12Q15022 739 aaKnown RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 SF3A2Q15428 464 aaKnown RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 TBCCQ15814 346 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 GGTA1PQ4G0N0 100 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 XKR6Q5GH73 641 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 LIPJQ5W064 366 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 FAM219BQ5XKK7 198 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 KANK2Q63ZY3 851 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 ICE2Q659A1 982 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 ATG9BQ674R7 924 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 CLEC6AQ6EIG7 209 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 LETMD1Q6P1Q0 360 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 SLCO4C1Q6ZQN7 724 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 ZNF438Q7Z4V0 828 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 KIRREL3Q8IZU9 778 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 EID2Q8N6I1 236 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 DCBLD1Q8N8Z6 715 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 L3MBTL4Q8NA19 623 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 OR6C4Q8NGE1 309 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 OR10G6Q8NH81 332 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 FLVCR1-AS1Q8TAF5 88 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 AGR3Q8TD06 166 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 SLC5A11Q8WWX8 675 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 RSC1A1Q92681 617 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 NEIL2Q969S2 332 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 GRAMD1AQ96CP6 724 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 CCT8L2Q96SF2 557 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 ACAT2Q9BWD1 397 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 FAM107BQ9H098 131 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 NSRP1Q9H0G5 558 aaKnown RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 RABEP2Q9H5N1 569 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 ACTR8Q9H981 624 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 HRASLS2Q9NWW9 162 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 LRIT1Q9P2V4 623 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 MARCOQ9UEW3 520 aaPredicted RBP7.78□□□□□ -1.16
TARDBP-219ENST00000617757 PADI4Q9UM07 663 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 RNF11Q9Y3C5 154 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 FIS1Q9Y3D6 152 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 TRAF6Q9Y4K3 522 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 TIMM22Q9Y584 194 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 U3KQA8 63 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 CUL9Q8IWT3 2517 aa7.78□□□□□ -1.16
TARDBP-219ENST00000617757 COL27A1Q8IZC6 1860 aaPredicted RBP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 PIPSLA2A3N6 862 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 SLCO1B7G3V0H7 640 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 MATN2O00339 956 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 CDX4O14627 284 aaPredicted RBP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 B4GAT1O43505 415 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 CRCPO75575 148 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 UBXN7O94888 489 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 FAM107AO95990 144 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 ENO1P06733 434 aaKnown RBP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 PROS1P07225 676 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 CAPN1P07384 714 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 C1GALT1C1LP0DN25 315 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 TROVE2P10155 538 aaKnown RBP eCLIP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 CDH1P12830 882 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 HGFP14210 728 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 JUPP14923 745 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 ALOX15P16050 662 aaPredicted RBP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 PNLIPP16233 465 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 TYRP1P17643 537 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 CD22P20273 847 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 VARSP26640 1264 aaKnown RBP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 ARL1P40616 181 aaPredicted RBP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 HNF4AP41235 474 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 HK2P52789 917 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 EPHA4P54764 986 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 MEF2AQ02078 507 aaPredicted RBP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 LAPTM5Q13571 262 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 NR0B2Q15466 257 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 SF1Q15637 639 aaKnown RBP7.77□□□□□ -1.17
TARDBP-219ENST00000617757 CSRP2Q16527 193 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 UGT3A2Q3SY77 523 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 CATSPEREQ5SY80 951 aa7.77□□□□□ -1.17
TARDBP-219ENST00000617757 KIAA1614Q5VZ46 1190 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 248.1 ms