RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	MAPKAPK2	P49137	400 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	LILRA4	P59901	499 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	FLI1	Q01543	452 aa	Predicted RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	IFRD2	Q12894	506 aa	Predicted RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	PKDCC	Q504Y2	493 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	HABP4	Q5JVS0	413 aa	Known RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	PRSS36	Q5K4E3	855 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	KIAA0319	Q5VV43	1072 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	PLET1	Q6UQ28	207 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	ALKAL1	Q6UXT8	129 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	TMPRSS11A	Q6ZMR5	421 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	HFE2	Q6ZVN8	426 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	AHSA2	Q719I0	299 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	SLC26A9	Q7LBE3	791 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	P3H2	Q8IVL5	708 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	RAET1E	Q8TD07	263 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	AHCYL2	Q96HN2	611 aa	Known RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	SAMD11	Q96NU1	681 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	UBQLN1	Q9UMX0	589 aa	Known RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185		V9GYH0	126 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185		F8W036	122 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	SMLR1	H3BR10	107 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	IPO13	O94829	963 aa	Known RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	CSF2	P04141	144 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	RPL9	P32969	192 aa	Known RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	GRK5	P34947	590 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	DCT	P40126	519 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	KCNK10	P57789	538 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	RAB10	P61026	200 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	EMX2	Q04743	252 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	GBX1	Q14549	363 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	GRM7	Q14831	915 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	SMN1	Q16637	294 aa	Known RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	ZMAT1	Q5H9K5	638 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	ARHGAP36	Q6ZRI8	547 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	SLC41A1	Q8IVJ1	513 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	CDH26	Q8IXH8	852 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	CYP4Z2P	Q8N1L4	340 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	DTWD1	Q8N5C7	304 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	COQ8B	Q96D53	544 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	MED10	Q9BTT4	135 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	SRR	Q9GZT4	340 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	SHARPIN	Q9H0F6	387 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	OR51E2	Q9H255	320 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	SMURF1	Q9HCE7	757 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	CYP4F12	Q9HCS2	524 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	TNPO3	Q9Y5L0	923 aa	Known RBP	11.27	□□□□□ -0.61
TP53-222	ENST00000617185	ALG5	Q9Y673	324 aa		11.27	□□□□□ -0.61
TP53-222	ENST00000617185	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	ANKRD28	O15084	1053 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	IFNA7	P01567	189 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	RAF1	P04049	648 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	RPS17	P08708	135 aa	Known RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	SLC2A3	P11169	496 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	GOT1	P17174	413 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	AZGP1	P25311	298 aa	Known RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	KCNC1	P48547	511 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	LIMK1	P53667	647 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	PURA	Q00577	322 aa	Known RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	CAP1	Q01518	475 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	SIM2	Q14190	667 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	TBCE	Q15813	527 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	FBXO43	Q4G163	708 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	GPR139	Q6DWJ6	353 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	GDF6	Q6KF10	455 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	TFAP2E	Q6VUC0	442 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	HIPK1	Q86Z02	1210 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	SPATA6L	Q8N4H0	392 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	C3orf58	Q8NDZ4	430 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	OR52K1	Q8NGK4	314 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	SIPA1	Q96FS4	1042 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	CHCHD6	Q9BRQ6	235 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	TRMO	Q9BU70	441 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	GHITM	Q9H3K2	345 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	ELOVL6	Q9H5J4	265 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	RAB23	Q9ULC3	237 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	MAPRE3	Q9UPY8	281 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	GMPPB	Q9Y5P6	360 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	PIR	O00625	290 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	MYL12B	O14950	172 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	WDR47	O94967	919 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	STAU1	O95793	577 aa	Known RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	POMC	P01189	267 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	MYL12A	P19105	171 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	IGFBP5	P24593	272 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	PSMB4	P28070	264 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	KIR2DL3	P43628	341 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	TAF6	P49848	677 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	ERVFC1	P60507	584 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	RAB14	P61106	215 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	ZNF79	Q15937	498 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	COL28A1	Q2UY09	1125 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	PAGE3	Q5JUK9	113 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	SYPL2	Q5VXT5	272 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	KDELC1	Q6UW63	502 aa		11.26	□□□□□ -0.61
TP53-222	ENST00000617185	RPS27L	Q71UM5	84 aa	Known RBP	11.26	□□□□□ -0.61
TP53-222	ENST00000617185	DEFB106A	Q8N104	65 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms