RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	FANCE	Q9HB96	536 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ASAH2	Q9NR71	780 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	AASS	Q9UDR5	926 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MYO1G	B0I1T2	1018 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PTGES3L	E9PB15	166 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RFXANK	O14593	260 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GNRH1	P01148	92 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SDC1	P18827	310 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PREP	P48147	710 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CSNK1D	P48730	415 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CASP9	P55211	416 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ARSI	Q5FYB1	569 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF621	Q6ZSS3	439 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TMEM132C	Q8N3T6	1108 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CPXM2	Q8N436	756 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ASB11	Q8WXH4	323 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	KAT8	Q9H7Z6	458 aa	Known RBP	13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PCDH12	Q9NPG4	1184 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	NOSIP	Q9Y314	301 aa	Known RBP	13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390		A0A1W2PPW3	197 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GRM6	O15303	877 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	LEFTY1	O75610	366 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CYP4B1	P13584	511 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TYR	P14679	529 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SLC7A9	P82251	487 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	IRF8	Q02556	426 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CBX2	Q14781	532 aa	Predicted RBP	13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CCSMST1	Q4G0I0	132 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	XKR6	Q5GH73	641 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CCNYL2	Q5T2Q4	361 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF697	Q5TEC3	545 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ANKRD33	Q7Z3H0	272 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GPR180	Q86V85	440 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MCOLN3	Q8TDD5	553 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RIOK2	Q9BVS4	552 aa	Known RBP	13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SLC12A9	Q9BXP2	914 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GORASP2	Q9H8Y8	452 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	INIP	Q9NRY2	104 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RHBDL2	Q9NX52	303 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	HCFC2	Q9Y5Z7	792 aa		13.49	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PER2	O15055	1255 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PABPC1	P11940	636 aa	Known RBP	13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PFKL	P17858	780 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	VEGFB	P49765	207 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TEAD2	Q15562	447 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GDPD4	Q6W3E5	623 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PRR23B	Q6ZRT6	265 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SYT12	Q8IV01	421 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	BPIFB6	Q8NFQ5	453 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	UBTD2	Q8WUN7	234 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PANX1	Q96RD7	426 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DPH2	Q9BQC3	489 aa	Predicted RBP	13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CCDC90B	Q9GZT6	254 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FAM83D	Q9H4H8	585 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	DNAJB9	Q9UBS3	223 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF639	Q9UID6	485 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PCDHGA8	Q9Y5G5	932 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	COL4A6	Q14031	1691 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	RANBP2	P49792	3224 aa	Known RBP	13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GRXCR2	A6NFK2	248 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	AGAP14	A8MT82	685 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MAN1A2	O60476	641 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CBSL	P0DN79	551 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CYP2A7	P20853	494 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	AGXT	P21549	392 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CBS	P35520	551 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	CLDN8	P56748	225 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	WDR5	P61964	334 aa	Known RBP	13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	HPCA	P84074	193 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FGD3	Q5JSP0	725 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MPP7	Q5T2T1	576 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ZNF555	Q8NEP9	628 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	OR2A12	Q8NGT7	310 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	GAB3	Q8WWW8	586 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ECHDC3	Q96DC8	303 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	SERHL	Q9NQF3	203 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PAK6	Q9NQU5	681 aa	Predicted RBP	13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FAM118A	Q9NWS6	357 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FAF1	Q9UNN5	650 aa	Predicted RBP	13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	HS3ST2	Q9Y278	367 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	WNT6	Q9Y6F9	365 aa		13.48	□□□□□ -0.25
CACNA1C-231	ENST00000616390	C16orf96	A6NNT2	1141 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	hCG_2039718	K7EN88	272 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PFDN1	O60925	122 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	KCNJ13	O60928	360 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MITF	O75030	526 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	XPA	P23025	273 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	MAP4	P27816	1152 aa	Known RBP	13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TSPAN7	P41732	249 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	ENTPD1	P49961	510 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	NTHL1	P78549	312 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	KCNAB2	Q13303	367 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	NAE1	Q13564	534 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	LY6G5C	Q5SRR4	150 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	PLPP4	Q5VZY2	271 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	FRG2	Q64ET8	278 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	TMEM215	Q68D42	235 aa		13.47	□□□□□ -0.25
CACNA1C-231	ENST00000616390	NOXRED1	Q6NXP6	359 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms