RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	SMG1	Q96Q15	3661 aa	Known RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ARHGEF33	A8MVX0	844 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197		H3BMH7	237 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	AGPS	O00116	658 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MYO1C	O00159	1063 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	SMAP	O00193	183 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	EIF3F	O00303	357 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	DNALI1	O14645	258 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PRICKLE3	O43900	615 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CEACAM4	O75871	244 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	UQCRH	P07919	91 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	HIST1H2AD	P20671	130 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	FBL	P22087	321 aa	Known RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MMP11	P24347	488 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MCM3	P25205	808 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ITGA3	P26006	1051 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	SLC1A2	P43004	574 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CARS	P49589	748 aa	Known RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	GNG11	P61952	73 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	RAPSN	Q13702	412 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	GBX1	Q14549	363 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MYBPC3	Q14896	1274 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	NDUFA9	Q16795	377 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	BBS9	Q3SYG4	887 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CCSMST1	Q4G0I0	132 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	COLEC12	Q5KU26	742 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	SPANXN3	Q5MJ09	141 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	DCAF10	Q5QP82	559 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MRPL14	Q6P1L8	145 aa	Known RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	SUSD1	Q6UWL2	747 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	UBE2R2	Q712K3	238 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MYO1H	Q8N1T3	1032 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	GALNT16	Q8N428	558 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ZADH2	Q8N4Q0	377 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	METTL27	Q8N6F8	245 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	FBXO15	Q8NCQ5	510 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	HIST1H2AH	Q96KK5	128 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PKP4	Q99569	1192 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	GPR21	Q99679	349 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	HIST1H2AJ	Q99878	128 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	H2AFJ	Q9BTM1	129 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CRB3	Q9BUF7	120 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	TRIM54	Q9BYV2	358 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ILKAP	Q9H0C8	392 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PCBD2	Q9H0N5	130 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	DDX47	Q9H0S4	455 aa	Known RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MLXIPL	Q9NP71	852 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	SEMA3G	Q9NS98	782 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ZNF282	Q9UDV7	671 aa	Predicted RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	TAC3	Q9UHF0	121 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PLAA	Q9Y263	795 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	DHRS7	Q9Y394	339 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	KLK4	Q9Y5K2	254 aa		10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	HELZ2	Q9BYK8	2649 aa	Known RBP	10.49	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ZCWPW2	A0A1B0GU75	182 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	OR2A25	A4D2G3	310 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	FITM1	A5D6W6	292 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ESPN	B1AK53	854 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	SLC16A8	O95907	504 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PDGFA	P04085	211 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	C8G	P07360	202 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CTSB	P07858	339 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	EZR	P15311	586 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	HRH2	P25021	359 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CXCR2	P25025	360 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	OR1D4	P47884	311 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CLCN7	P51798	805 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	EMP3	P54852	163 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	DR1	Q01658	176 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PRDX1	Q06830	199 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PDAP1	Q13442	181 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CUL1	Q13616	776 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	FASTK	Q14296	549 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CRYM	Q14894	314 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	NKG7	Q16617	165 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	KCTD19	Q17RG1	926 aa	Predicted RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	TUBB8	Q3ZCM7	444 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	NADK2	Q4G0N4	442 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	RNASEH2B	Q5TBB1	312 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	GARNL3	Q5VVW2	1013 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ICE2	Q659A1	982 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	KIAA0408	Q6ZU52	694 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	RNF44	Q7L0R7	432 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	IQCK	Q8N0W5	287 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CSNK1A1L	Q8N752	337 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	GALNT11	Q8NCW6	608 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	ASB11	Q8WXH4	323 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PNPLA2	Q96AD5	504 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MIB2	Q96AX9	1013 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MIEF2	Q96C03	454 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	MVB12A	Q96EY5	273 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	CAPZA3	Q96KX2	299 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	SIGLEC10	Q96LC7	697 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	SMAD5	Q99717	465 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	NAPG	Q99747	312 aa	Predicted RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	PLCD4	Q9BRC7	762 aa		10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	TRIM56	Q9BRZ2	755 aa	Known RBP	10.48	□□□□□ -0.73
NPIPB4-222	ENST00000614197	AARSD1	Q9BTE6	412 aa	Known RBP	10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms