RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PIAS2O75928 621 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 CELA2BP08218 269 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 ALOX15P16050 662 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 EPB42P16452 691 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 MPSTP25325 297 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 PKLRP30613 574 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 GRK6P43250 576 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 CCR10P46092 362 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 RXRGP48443 463 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 PNLIPRP1P54315 467 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 TBPL1P62380 186 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 UBE2IP63279 158 aaKnown RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 CFHR1Q03591 330 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 PCDH1Q08174 1060 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 TARDBPQ13148 414 aaKnown RBP eCLIP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 SHBQ15464 509 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 TERF2Q15554 542 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 FBXO48Q5FWF7 155 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 IYDQ6PHW0 289 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 IL27RAQ6UWB1 636 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 RPS27LQ71UM5 84 aaKnown RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 PIGWQ7Z7B1 504 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 TAF8Q7Z7C8 310 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 GKN2Q86XP6 184 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 WDR75Q8IWA0 830 aaKnown RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 TEX9Q8N6V9 391 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF781Q8N8C0 355 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 AVL9Q8NBF6 648 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 BCAS4Q8TDM0 211 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 TRPC4APQ8TEL6 797 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF473Q8WTR7 871 aaKnown RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 STON2Q8WXE9 905 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 ESAMQ96AP7 390 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 NXPE2Q96DL1 559 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 MOCOSQ96EN8 888 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 FAR2Q96K12 515 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 FERD3LQ96RJ6 166 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 SGPP1Q9BX95 441 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 TRIM55Q9BYV6 548 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 FAM107BQ9H098 131 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 SEMA4BQ9NPR2 832 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 ACSS2Q9NR19 701 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 DNAJC11Q9NVH1 559 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 GPRC5BQ9NZH0 403 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 KLHL14Q9P2G3 628 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 ZNF624Q9P2J8 865 aaPredicted RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 CFAP20Q9Y6A4 193 aaKnown RBP11.06□□□□□ -0.64
SLIRP-212ENST00000613856 CSNK1G3Q9Y6M4 447 aa11.06□□□□□ -0.64
SLIRP-212ENST00000613856 E7ENX8 843 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 LMO7DNF2Z398 122 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 NDUFAB1O14561 156 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 OR7A17O14581 309 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 YKT6O15498 198 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 AQP9O43315 295 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 WDR47O94967 919 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 ESRRBO95718 433 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 OTCP00480 354 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 FGF4P08620 206 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 XRCC1P18887 633 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 SLC19A1P41440 591 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 RPL14P50914 215 aaKnown RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 CCT8P50990 548 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 RAB28P51157 221 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 CDH13P55290 713 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 CXADRP78310 365 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 SH3BP2P78314 561 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 TAP2Q03519 686 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 TLE3Q04726 772 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 CDC16Q13042 620 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 TRAF3Q13114 568 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 NAE1Q13564 534 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 KRT33BQ14525 404 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 GGTA1PQ4G0N0 100 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 SH2D4BQ5SQS7 431 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 HES3Q5TGS1 186 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 CAPN13Q6MZZ7 669 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 GPRIN3Q6ZVF9 776 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 SPATA21Q7Z572 469 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 THOC6Q86W42 341 aaKnown RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 TMPRSS12Q86WS5 348 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 RBM12BQ8IXT5 1001 aaKnown RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 SYTL1Q8IYJ3 562 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 SFRP1Q8N474 314 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 AFAP1L2Q8N4X5 818 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 OR52E1Q8NGJ3 308 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 OR2L8Q8NGY9 312 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 LMX1AQ8TE12 382 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 CXorf40BQ96DE9 158 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 MAGEB10Q96LZ2 347 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 ELF4Q99607 663 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 COL12A1Q99715 3063 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 NTMT1Q9BV86 223 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 TWSG1Q9GZX9 223 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 ATG10Q9H0Y0 220 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 STN1Q9H668 368 aaKnown RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 CAAP1Q9H8G2 361 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 NOL11Q9H8H0 719 aaKnown RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 MID1IP1Q9NPA3 183 aa11.05□□□□□ -0.64
SLIRP-212ENST00000613856 CCDC177Q9NQR7 707 aaPredicted RBP11.05□□□□□ -0.64
SLIRP-212ENST00000613856 FTSJ1Q9UET6 329 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms