RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 RNF44Q7L0R7 432 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 NDUFAF7Q7L592 441 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 LDB1Q86U70 411 aaPredicted RBP22.31■■□□□ 1.16
MMP28-203ENST00000612672 SHISA5Q8N114 240 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 OR52K1Q8NGK4 314 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 SLC22A18Q96BI1 424 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 PPP1R2P1Q96PQ5 205 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 RUBCNLQ9H714 662 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 ABI3Q9P2A4 366 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 ZNF282Q9UDV7 671 aaPredicted RBP22.31■■□□□ 1.16
MMP28-203ENST00000612672 SCN2AQ99250 2005 aa22.31■■□□□ 1.16
MMP28-203ENST00000612672 IGHV1-45A0A0A0MS14 117 aa22.3■■□□□ 1.16
MMP28-203ENST00000612672 DYTNA2CJ06 578 aa22.3■■□□□ 1.16
MMP28-203ENST00000612672 SERPINA7P05543 415 aa22.3■■□□□ 1.16
MMP28-203ENST00000612672 SNRPNP63162 240 aaKnown RBP22.3■■□□□ 1.16
MMP28-203ENST00000612672 TBX2Q13207 712 aaPredicted RBP22.3■■□□□ 1.16
MMP28-203ENST00000612672 FAM214AQ32MH5 1076 aa22.3■■□□□ 1.16
MMP28-203ENST00000612672 IL1RAPL1Q9NZN1 696 aa22.3■■□□□ 1.16
MMP28-203ENST00000612672 SUCOQ9UBS9 1254 aaKnown RBP22.3■■□□□ 1.16
MMP28-203ENST00000612672 KLK4Q9Y5K2 254 aa22.3■■□□□ 1.16
MMP28-203ENST00000612672 IDSB3KWA1 339 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 TARM1B6A8C7 271 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 EIF2S1P05198 315 aaKnown RBP22.29■■□□□ 1.16
MMP28-203ENST00000612672 COX6B1P14854 86 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 FBLP22087 321 aaKnown RBP22.29■■□□□ 1.16
MMP28-203ENST00000612672 AOAHP28039 575 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 GRIA1P42261 906 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 OCA2Q04671 838 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 PCOLCEQ15113 449 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 HIBCHQ6NVY1 386 aaPredicted RBP22.29■■□□□ 1.16
MMP28-203ENST00000612672 CNSTQ6PJW8 725 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 TMEM207Q6UWW9 146 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 OR2L3Q8NG85 312 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 ZUFSPQ96AP4 578 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.29■■□□□ 1.16
MMP28-203ENST00000612672 SEC14L3Q9UDX4 400 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 PCDHA13Q9Y5I0 950 aa22.29■■□□□ 1.16
MMP28-203ENST00000612672 A0A0U1RQJ8 604 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 CBFA2T2O43439 604 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 SRPX2O60687 465 aaPredicted RBP22.28■■□□□ 1.16
MMP28-203ENST00000612672 SLCO2B1O94956 709 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 FASTKQ14296 549 aaKnown RBP22.28■■□□□ 1.16
MMP28-203ENST00000612672 TESK1Q15569 626 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 C3AR1Q16581 482 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 PRTGQ2VWP7 1150 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 PRMT9Q6P2P2 845 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 AFTPHQ6ULP2 937 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 NCCRP1Q6ZVX7 275 aaPredicted RBP22.28■■□□□ 1.16
MMP28-203ENST00000612672 AMER3Q8N944 861 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 OR2A1Q8NGT9 310 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 VPS50Q96JG6 964 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 CARD6Q9BX69 1037 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 IGSF5Q9NSI5 407 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 MARCH4Q9P2E8 410 aaPredicted RBP22.28■■□□□ 1.16
MMP28-203ENST00000612672 SLC39A10Q9ULF5 831 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 DUSP10Q9Y6W6 482 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 FAM169AQ9Y6X4 670 aa22.28■■□□□ 1.16
MMP28-203ENST00000612672 BMP10O95393 424 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 TPM1P09493 284 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 EMP2P54851 167 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 ACVR1Q04771 509 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 SYT16Q17RD7 645 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 TSTD2Q5T7W7 516 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 FBXO42Q6P3S6 717 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 ASZ1Q8WWH4 475 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 ALS2CR12Q96Q35 445 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 CHST11Q9NPF2 352 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 TINAGQ9UJW2 476 aa22.27■■□□□ 1.16
MMP28-203ENST00000612672 OR2A25A4D2G3 310 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 AKR1B15C9JRZ8 316 aaPredicted RBP22.26■■□□□ 1.15
MMP28-203ENST00000612672 RASAL1O95294 804 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 C1orf105O95561 183 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 RPN2P04844 631 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 ST13P50502 369 aaKnown RBP22.26■■□□□ 1.15
MMP28-203ENST00000612672 HKDC1Q2TB90 917 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 RPTNQ6XPR3 784 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 CNGA4Q8IV77 575 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 ARHGEF39Q8N4T4 335 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 TC2NQ8N9U0 490 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 OR4L1Q8NH43 312 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 LRRC45Q96CN5 670 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 TMEM121Q9BTD3 319 aa22.26■■□□□ 1.15
MMP28-203ENST00000612672 LOC102723996A0A087X1L8 192 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 TCRBV7S2A1N4TA0A589 114 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 H0YGG7 62 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 FDXRP22570 491 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 KIR3DL1P43629 444 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 ARF3P61204 181 aaPredicted RBP22.25■■□□□ 1.15
MMP28-203ENST00000612672 DSG2Q14126 1118 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 NEK10Q6ZWH5 1172 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 HMGCLL1Q8TB92 370 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 RNF32Q9H0A6 362 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 TRPC4Q9UBN4 977 aa22.25■■□□□ 1.15
MMP28-203ENST00000612672 RUVBL1Q9Y265 456 aaKnown RBP22.25■■□□□ 1.15
MMP28-203ENST00000612672 GTF3C1Q12789 2109 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 IGKV1-8A0A0C4DH67 115 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 ZNHIT1O43257 154 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 SLC19A2O60779 497 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 PRAMEF2O60811 474 aa22.24■■□□□ 1.15
MMP28-203ENST00000612672 TJP3O95049 919 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms