RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 NKAPQ8N5F7 415 aaKnown RBP11.84□□□□□ -0.51
CBWD3-208ENST00000612050 TBC1D19Q8N5T2 526 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 OR2A1Q8NGT9 310 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 ATL1Q8WXF7 558 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 TSPAN17Q96FV3 270 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 ZFYVE21Q9BQ24 234 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 DPH7Q9BTV6 452 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 PHACTR1Q9C0D0 580 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 SPRTNQ9H040 489 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-208ENST00000612050 PARVBQ9HBI1 364 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 SAYSD1Q9NPB0 183 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 TAC3Q9UHF0 121 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 TCFL5Q9UL49 500 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 KLHL20Q9Y2M5 609 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 CHD6Q8TD26 2715 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 CACNA1GO43497 2377 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 PCM1Q15154 2024 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 A0A0J9YVX5 310 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 B8ZZF3 427 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 E7ESA3 106 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 GFYI3L273 518 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 TERTO14746 1132 aaKnown RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 EIF2S1P05198 315 aaKnown RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 ENO2P09104 434 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 EZRP15311 586 aaKnown RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 PSMB5P28074 263 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 PLTPP55058 493 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 AP1S2P56377 157 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 VSX2P58304 361 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 PRDX1Q06830 199 aaKnown RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 MUM1Q2TAK8 710 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 ICE2Q659A1 982 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 PAQR3Q6TCH7 311 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF517Q6ZMY9 492 aaPredicted RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 CAPN12Q6ZSI9 719 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 PIWIL4Q7Z3Z4 852 aaKnown RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 CCDC25Q86WR0 208 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 IGDCC3Q8IVU1 814 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 SLC38A9Q8NBW4 561 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 GIMAP7Q8NHV1 300 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF480Q8WV37 535 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 EEF1AKMT1Q8WVE0 214 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 PWWP2AQ96N64 755 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 SLC30A3Q99726 388 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 CUTCQ9NTM9 273 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 DHCR7Q9UBM7 475 aaKnown RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 NXT1Q9UKK6 140 aaKnown RBP11.83□□□□□ -0.52
CBWD3-208ENST00000612050 CDC14AQ9UNH5 594 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 KLK4Q9Y5K2 254 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 KCNMB2Q9Y691 235 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 ITPR1Q14643 2758 aa11.83□□□□□ -0.52
CBWD3-208ENST00000612050 DSCR3O14972 297 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 PRICKLE3O43900 615 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 F7P08709 466 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 STX2P32856 288 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 GABRA4P48169 554 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 PMS2P54278 862 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 RPS18P62269 152 aaKnown RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 FASTKQ14296 549 aaKnown RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 SSPNQ14714 243 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 NDUFA9Q16795 377 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 NKAIN1Q4KMZ8 207 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 LACTB2Q53H82 288 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 WASHC2DQ5SRD0 308 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 RBM20Q5T481 1227 aaKnown RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 PRAMEF13Q5VWM6 474 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 FCRL6Q6DN72 434 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 PRMT9Q6P2P2 845 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 TRMT10BQ6PF06 316 aaKnown RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 PCSK4Q6UW60 755 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 FRA10AC1Q70Z53 315 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 MED25Q71SY5 747 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 PRICKLE2Q7Z3G6 844 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 EXD3Q8N9H8 876 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 FKBP10Q96AY3 582 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 ALKBH8Q96BT7 664 aaKnown RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 CABS1Q96KC9 395 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 FER1L6-AS2Q96M78 137 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 PLCD4Q9BRC7 762 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 HAUS8Q9BT25 410 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 TSPYL1Q9H0U9 437 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 ARL15Q9NXU5 204 aa11.82□□□□□ -0.52
CBWD3-208ENST00000612050 MTRF1LQ9UGC7 380 aaKnown RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 PTRH2Q9Y3E5 179 aaKnown RBP11.82□□□□□ -0.52
CBWD3-208ENST00000612050 LAMA5O15230 3695 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 FAM95CA0A1B0GW59 222 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 HYKKA2RU49 373 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 E7ENX8 843 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 ANXA5P08758 320 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 FDXRP22570 491 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 OTX2P32243 289 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 CDKN2DP55273 166 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 TAP2Q03519 686 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 OCA2Q04671 838 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 COL9A2Q14055 689 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-208ENST00000612050 ATP1A1-AS1Q5TC04 95 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 DUPD1Q68J44 220 aa11.81□□□□□ -0.52
CBWD3-208ENST00000612050 CAPN13Q6MZZ7 669 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-208ENST00000612050 FAM198BQ6UWH4 519 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms