RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 MMP11P24347 488 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 VARSP26640 1264 aaKnown RBP16.6■□□□□ 0.25
PRKN-208ENST00000610470 SOX8P57073 446 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 FOXL2P58012 376 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 CTBP1Q13363 440 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 PPP1R7Q15435 360 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 NKG7Q16617 165 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 SLC6A19Q695T7 634 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 FRMPD2BQ6IN97 320 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 PRMT9Q6P2P2 845 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 CLEC18BQ6UXF7 455 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 COX15Q7KZN9 410 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 REXO1L1PQ8IX06 675 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 PPIL6Q8IXY8 311 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 RBMXL3Q8N7X1 1067 aaKnown RBP16.6■□□□□ 0.25
PRKN-208ENST00000610470 CLEC18CQ8NCF0 446 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 FBXO15Q8NCQ5 510 aaPredicted RBP16.6■□□□□ 0.25
PRKN-208ENST00000610470 COG1Q8WTW3 980 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 VPS50Q96JG6 964 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 PKP4Q99569 1192 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 ZFYVE21Q9BQ24 234 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 DPH7Q9BTV6 452 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 ACAT2Q9BWD1 397 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 MFRPQ9BY79 579 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 MRPS30Q9NP92 439 aaKnown RBP16.6■□□□□ 0.25
PRKN-208ENST00000610470 UTP6Q9NYH9 597 aaKnown RBP16.6■□□□□ 0.25
PRKN-208ENST00000610470 ZC3H7BQ9UGR2 993 aaKnown RBP16.6■□□□□ 0.25
PRKN-208ENST00000610470 CDC23Q9UJX2 597 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 MAP4K5Q9Y4K4 846 aa16.6■□□□□ 0.25
PRKN-208ENST00000610470 CCDC88CQ9P219 2028 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 EIF2S1P05198 315 aaKnown RBP16.59■□□□□ 0.25
PRKN-208ENST00000610470 MPC1LP0DKB6 136 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 SLC1A2P43004 574 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 OR1D4P47884 311 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 PNLIPRP1P54315 467 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 AIMP2Q13155 320 aaKnown RBP16.59■□□□□ 0.25
PRKN-208ENST00000610470 TSTA3Q13630 321 aaPredicted RBP16.59■□□□□ 0.25
PRKN-208ENST00000610470 MUM1Q2TAK8 710 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 SUSD1Q6UWL2 747 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 METTL27Q8N6F8 245 aaPredicted RBP16.59■□□□□ 0.25
PRKN-208ENST00000610470 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRKN-208ENST00000610470 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.59■□□□□ 0.25
PRKN-208ENST00000610470 TM9SF4Q92544 642 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 INPP5DQ92835 1189 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 SIGLEC10Q96LC7 697 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 SPSB2Q99619 263 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 SLC30A3Q99726 388 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 FAM167BQ9BTA0 163 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 ZNF304Q9HCX3 659 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 SLC6A20Q9NP91 592 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 DHRS7Q9Y394 339 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 COL12A1Q99715 3063 aa16.59■□□□□ 0.25
PRKN-208ENST00000610470 LOC105369274A0A096LPK9 316 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 LOC102723532A0A0G2JNH3 316 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 ZBTB14O43829 449 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 PRDX1Q06830 199 aaKnown RBP16.58■□□□□ 0.24
PRKN-208ENST00000610470 CUL1Q13616 776 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 INPP5JQ15735 1006 aaPredicted RBP16.58■□□□□ 0.24
PRKN-208ENST00000610470 RNASEH2BQ5TBB1 312 aaKnown RBP16.58■□□□□ 0.24
PRKN-208ENST00000610470 FBXO42Q6P3S6 717 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 ZNF549Q6P9A3 640 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 OR4N4Q8N0Y3 316 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 AGGF1Q8N302 714 aaeCLIP16.58■□□□□ 0.24
PRKN-208ENST00000610470 Q8NA96 180 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 GIMAP7Q8NHV1 300 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 GABPB2Q8TAK5 448 aaPredicted RBP16.58■□□□□ 0.24
PRKN-208ENST00000610470 ASB11Q8WXH4 323 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 COL26A1Q96A83 441 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 PLCD4Q9BRC7 762 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 SOX17Q9H6I2 414 aaPredicted RBP16.58■□□□□ 0.24
PRKN-208ENST00000610470 ZNF552Q9H707 407 aaPredicted RBP16.58■□□□□ 0.24
PRKN-208ENST00000610470 SEMA3GQ9NS98 782 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 LUZP4Q9P127 313 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 CTSFQ9UBX1 484 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 TAC3Q9UHF0 121 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 FBXL4Q9UKA2 621 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 FBXO5Q9UKT4 447 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 SNX12Q9UMY4 172 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 MED16Q9Y2X0 877 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 MAU2Q9Y6X3 613 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 ANKRD12Q6UB98 2062 aa16.58■□□□□ 0.24
PRKN-208ENST00000610470 PTPN13Q12923 2485 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 VSTM2BA6NLU5 285 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 H0YGG7 62 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 EIF3FO00303 357 aaPredicted RBP16.57■□□□□ 0.24
PRKN-208ENST00000610470 NRP2O60462 931 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 SLC16A8O95907 504 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 SYF2O95926 243 aaKnown RBP16.57■□□□□ 0.24
PRKN-208ENST00000610470 F7P08709 466 aaPredicted RBP16.57■□□□□ 0.24
PRKN-208ENST00000610470 PGAM1P18669 254 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 ITGA3P26006 1051 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 CARSP49589 748 aaKnown RBP16.57■□□□□ 0.24
PRKN-208ENST00000610470 EMP3P54852 163 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 ARF3P61204 181 aaPredicted RBP16.57■□□□□ 0.24
PRKN-208ENST00000610470 YBX1P67809 324 aaKnown RBP16.57■□□□□ 0.24
PRKN-208ENST00000610470 ABATP80404 500 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 MPP1Q00013 466 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 OCA2Q04671 838 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 PTK6Q13882 451 aa16.57■□□□□ 0.24
PRKN-208ENST00000610470 RBBP7Q16576 425 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms