RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 YIPF4Q9BSR8 244 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 CD244Q9BZW8 370 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 MKS1Q9NXB0 559 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 SPATA7Q9P0W8 599 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 TMED5Q9Y3A6 229 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 PRKAB1Q9Y478 270 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 CPSF4LA6NMK7 179 aaKnown RBP13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 SDHDO14521 159 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 PGLSO95336 258 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 AZGP1P25311 298 aaKnown RBP13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 GDI1P31150 447 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 DNAJA1P31689 397 aaKnown RBP13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 IL18R1Q13478 541 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 IL18Q14116 193 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 FAM91A1Q658Y4 838 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 RPTNQ6XPR3 784 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 PRR23BQ6ZRT6 265 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 ERMP1Q7Z2K6 904 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 LGI4Q8N135 537 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 LRRC17Q8N6Y2 441 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 TTLQ8NG68 377 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 HPS1Q92902 700 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 NSUN5Q96P11 429 aaKnown RBP13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 TRMT61BQ9BVS5 477 aaKnown RBP13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 NECTIN3Q9NQS3 549 aa13.9□□□□□ -0.18
PCDHB16-201ENST00000609684 CLDN25C9JDP6 229 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 TOR1BO14657 336 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 ZNF8P17098 575 aaPredicted RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 AKT2P31751 481 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 SFT2D3Q587I9 215 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 OR2T5Q6IEZ7 315 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 PLET1Q6UQ28 207 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 ENPP7Q6UWV6 458 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 ZNF433Q8N7K0 673 aaPredicted RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 OR10Q1Q8NGQ4 319 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 OR2T29Q8NH02 315 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 TP53INP1Q96A56 240 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 BIRC7Q96CA5 298 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 EDDM13A0A1B0GTR0 161 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 FAM92AA1XBS5 289 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 ERI3O43414 337 aaKnown RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 CYP11A1P05108 521 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 RPL10P27635 214 aaKnown RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 TFGQ92734 400 aaPredicted RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 OMA1Q96E52 524 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 TXLNGYQ9BZA5 131 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 IL1RAPQ9NPH3 570 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 XKRYO14609 159 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 CD1DP15813 335 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 PREPP48147 710 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 SLC13A2Q13183 592 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 NFATC2Q13469 925 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 PDCD4Q53EL6 469 aaKnown RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 ZNF311Q5JNZ3 666 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 UBAP2Q5T6F2 1119 aaKnown RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 STEAP4Q687X5 459 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 CYS1Q717R9 158 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 TMEM145Q8NBT3 493 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 GPR151Q8TDV0 419 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 SNX33Q8WV41 574 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 RGMAQ96B86 450 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 GAL3ST4Q96RP7 486 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 SYT11Q9BT88 431 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 FAM240BA0A1B0GVZ2 78 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 PRORSD1PA6NEY8 169 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 CNMDO75829 334 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 ALPPP05187 535 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 CSNK2A2P19784 350 aaPredicted RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 MPIP34949 423 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 AVPR1BP47901 424 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 RNASE12Q5GAN4 147 aaKnown RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 OR10H5Q8NGA6 315 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 BPIFB1Q8TDL5 484 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 LRCH3Q96II8 777 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 MARCH4Q9P2E8 410 aaPredicted RBP13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 DHRS7Q9Y394 339 aa13.89□□□□□ -0.19
PCDHB16-201ENST00000609684 S1PR4O95977 384 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 SDC2P34741 201 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 NIPAL4Q0D2K0 466 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 PDSS2Q86YH6 399 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 CMTM7Q96FZ5 175 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 SLC38A3Q99624 504 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 ABCG4Q9H172 646 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 TRNAU1APQ9NX07 287 aaKnown RBP13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 KRT33AO76009 404 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 MTTPP55157 894 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 C6orf136Q5SQH8 315 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 SLC30A8Q8IWU4 369 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 SMPDL3AQ92484 453 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 IL12RB2Q99665 862 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 ARHGAP39Q9C0H5 1083 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 OR51B5Q9H339 312 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 TPT1P8Q9HAU6 139 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 STON1Q9Y6Q2 735 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 PSIP1O75475 530 aaKnown RBP13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 CREG1O75629 220 aa13.88□□□□□ -0.19
PCDHB16-201ENST00000609684 GBAP04062 536 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms