RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CNPP09543 421 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 C4AP0C0L4 1744 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 UBTFL1P0CB47 393 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 T-ENOLP0DO92 83 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 THRAP10827 490 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ATF2P15336 505 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 NME2P22392 152 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 CD40LGP29965 261 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 NR4A2P43354 598 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF143P52747 638 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 OAZ1P54368 228 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 IRX4P78413 519 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 LRRC63Q05C16 580 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 HYAL2Q12891 473 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ADGRE1Q14246 886 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF273Q14593 569 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ZXDCQ2QGD7 858 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 EXOSC6Q5RKV6 272 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PHYHD1Q5SRE7 291 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ZBTB37Q5TC79 503 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM171A1Q5VUB5 890 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 RNLSQ5VYX0 342 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PRMT9Q6P2P2 845 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 RFWD3Q6PCD5 774 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 HAUS6Q7Z4H7 955 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 BIVMQ86UB2 503 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF589Q86UQ0 364 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 C12orf40Q86WS4 652 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 TMC8Q8IU68 726 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ZDHHC21Q8IVQ6 265 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 DMRTC2Q8IXT2 367 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ABRAQ8N0Z2 381 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 FSTL5Q8N475 847 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM116Q8NCL8 245 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 STEAP2Q8NFT2 490 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 OR52N1Q8NH53 320 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 OR56A3Q8NH54 315 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 DTX3LQ8TDB6 740 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 CD300LFQ8TDQ1 290 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PIK3R3Q92569 461 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 GLG1Q92896 1179 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ELMO3Q96BJ8 720 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 WDR89Q96FK6 387 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 TOX2Q96NM4 488 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 KIF20BQ96Q89 1820 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 TRPM7Q96QT4 1865 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 RIT2Q99578 217 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 HINT2Q9BX68 163 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 BCL2L14Q9BZR8 327 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 NAPBQ9H115 298 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 DPEP2Q9H4A9 486 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ACTR8Q9H981 624 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 MCCC2Q9HCC0 563 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 FSCN3Q9NQT6 498 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PNPLA3Q9NST1 481 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 NDUFAF4Q9P032 175 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 MRPS7Q9Y2R9 242 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PRELID3BQ9Y3B1 194 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 OR2A25A4D2G3 310 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 GRID2IPA4D2P6 1211 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 EFCAB10A6NFE3 127 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 GABRR3A8MPY1 467 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 MEIS1O00470 390 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 CLIC2O15247 247 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 KCNQ3O43525 872 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 DYRK3O43781 588 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 FKBP6O75344 327 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 CABYRO75952 493 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 YES1P07947 543 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 GSTP1P09211 210 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 CDH1P12830 882 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 RPA2P15927 270 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 HOXB8P17481 243 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 LBPP18428 481 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 DDCP20711 480 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 FBLN1P23142 703 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 SUCLG1P53597 346 aaKnown RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 CLDN8P56748 225 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 TEFQ10587 303 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PTP4A2Q12974 167 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 UGT3A2Q3SY77 523 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PPM1JQ5JR12 505 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 SFRP5Q5T4F7 317 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 GCNT6Q5T4J0 391 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 UBE2UQ5VVX9 321 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 MED25Q71SY5 747 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 PDZD3Q86UT5 571 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 GPR180Q86V85 440 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 GPBP1Q86WP2 473 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM219AQ8IW50 185 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ULK2Q8IYT8 1036 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 ARMC10Q8N2F6 343 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 SVOPQ8N4V2 548 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 OR6B3Q8NGW1 331 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 MAFAQ8NHW3 353 aaPredicted RBP4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 DTD1Q8TEA8 209 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 DCAF4Q8WV16 495 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 HEXDCQ8WVB3 486 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 RLN3Q8WXF3 142 aa4.89□□□□□ -1.63
SPTBN1-206ENST00000602898 LARP4BQ92615 738 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms