RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	CEP128	Q6ZU80	1094 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	BEST3	Q8N1M1	668 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	HORMAD2	Q8N7B1	307 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	LINC01555	Q8NAE3	123 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	SYN2	Q92777	582 aa	Predicted RBP	11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	NINJ1	Q92982	152 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	DNAJC1	Q96KC8	554 aa	Known RBP	11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	ALS2CR12	Q96Q35	445 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	ZNF700	Q9H0M5	742 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	KCNJ16	Q9NPI9	418 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	ANKRD10	Q9NXR5	420 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	DDX56	Q9NY93	547 aa	Known RBP	11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	STOX2	Q9P2F5	926 aa	Predicted RBP	11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	IMPACT	Q9P2X3	320 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	KCNN3	Q9UGI6	736 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	EDAR	Q9UNE0	448 aa		11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	AAR2	Q9Y312	384 aa	Known RBP	11.66	□□□□□ -0.54
NUP62-223	ENST00000601665	IGLV3-12	A0A075B6K2	115 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	TRBV5-4	A0A0C4DH59	114 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	TARM1	B6A8C7	271 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	ZNHIT1	O43257	154 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	CTSV	O60911	334 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	SUN1	O94901	812 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	FKBP9	O95302	570 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	OR56A5	P0C7T3	313 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	PRSS56	P0CW18	603 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	C8orf89	P0DMQ9	161 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	FOSL1	P15407	271 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	ZNF24	P17028	368 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	LTB	Q06643	244 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	FOXD4	Q12950	439 aa	Predicted RBP	11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	PCOLCE	Q15113	449 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	CEBPE	Q15744	281 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	TAZ	Q16635	292 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	DBN1	Q16643	649 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	BTBD16	Q32M84	506 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	ACER2	Q5QJU3	275 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	MFSD4B	Q5TF39	518 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	FCRLB	Q6BAA4	426 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	FRMPD2B	Q6IN97	320 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	TTC23L	Q6PF05	361 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	MFSD7	Q6UXD7	560 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	RANBP10	Q6VN20	620 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	DCUN1D3	Q8IWE4	304 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	RAB42	Q8N4Z0	105 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	LMNTD1	Q8N9Z9	388 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	OR2L8	Q8NGY9	312 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	HAUS1	Q96CS2	278 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	IL17F	Q96PD4	163 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	DMRTA2	Q96SC8	542 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	C19orf43	Q9BQ61	176 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	REPIN1	Q9BWE0	567 aa	Known RBP	11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	GBA3	Q9H227	469 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	CXXC4	Q9H2H0	198 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	DNAJB12	Q9NXW2	375 aa	Known RBP	11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	MKL2	Q9ULH7	1088 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	CPAMD8	Q8IZJ3	1885 aa		11.65	□□□□□ -0.54
NUP62-223	ENST00000601665	LOC105369274	A0A096LPK9	316 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	LOC102723532	A0A0G2JNH3	316 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	SLC5A10	A0PJK1	596 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	NKX2-6	A6NCS4	301 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	ASPDH	A6ND91	283 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	SEC24D	O94855	1032 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	MED26	O95402	600 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	SERPINC1	P01008	464 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	TPO	P07202	933 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	IGFBP2	P18065	325 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	CHRNB4	P30926	498 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	GTF3C1	Q12789	2109 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	TUBA3C	Q13748	450 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	MEP1A	Q16819	746 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	FIGN	Q5HY92	759 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	LRRC38	Q5VT99	294 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	TMEM211	Q6ICI0	200 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	SPINK14	Q6IE38	97 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	TUBA3E	Q6PEY2	450 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	OR4N4	Q8N0Y3	316 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	GSDMB	Q8TAX9	411 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	MVB12A	Q96EY5	273 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	MMAB	Q96EY8	250 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	FRMD6	Q96NE9	622 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	SIGLEC12	Q96PQ1	595 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	MIPEP	Q99797	713 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	TRIM51	Q9BSJ1	452 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	RAB11FIP5	Q9BXF6	653 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	PACSIN1	Q9BY11	444 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	HES7	Q9BYE0	225 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	KCNK13	Q9HB14	408 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	ENAM	Q9NRM1	1142 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	PRSS21	Q9Y6M0	314 aa		11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	NSD1	Q96L73	2696 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP62-223	ENST00000601665	LOC102723996	A0A087X1L8	192 aa		11.63	□□□□□ -0.55
NUP62-223	ENST00000601665	USP27X	A6NNY8	438 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms