RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PLCL2Q9UPR0 1127 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 AP1M2Q9Y6Q5 423 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 SPTBP11277 2137 aa15.55■□□□□ 0.08
LSM4-206ENST00000600289 ZNF891A8MT65 544 aaPredicted RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 CXorf49A8MYA2 514 aaPredicted RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 C21orf140B9A014 251 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 E7ENX8 843 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 HCRTR1O43613 425 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 CCNDBP1O95273 360 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 RECKO95980 971 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 ENO2P09104 434 aaPredicted RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 PSMB5P28074 263 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 IMPA1P29218 277 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 GP5P40197 560 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 GRIA3P42263 894 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 GCGRP47871 477 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 TAP2Q03519 686 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 ZC3H12BQ5HYM0 836 aaKnown RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 FIGLAQ6QHK4 219 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 CAPN12Q6ZSI9 719 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 CCDC25Q86WR0 208 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 SPNS2Q8IVW8 549 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 GPR135Q8IZ08 494 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 DSELQ8IZU8 1212 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 SLC38A9Q8NBW4 561 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 MCOLN3Q8TDD5 553 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 CCDC138Q96M89 665 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 ZNF285Q96NJ3 590 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 RBBP8Q99708 897 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 DPH2Q9BQC3 489 aaPredicted RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 ACTR5Q9H9F9 607 aaPredicted RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 MTRF1LQ9UGC7 380 aaKnown RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 ADAMTS6Q9UKP5 1117 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 NOVA2Q9UNW9 492 aaKnown RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 PDE10AQ9Y233 779 aa15.54■□□□□ 0.08
LSM4-206ENST00000600289 HEMK1Q9Y5R4 338 aaPredicted RBP15.54■□□□□ 0.08
LSM4-206ENST00000600289 OR2A25A4D2G3 310 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 OR2B3O76000 313 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 WISP3O95389 354 aaPredicted RBP15.53■□□□□ 0.08
LSM4-206ENST00000600289 ITGB2P05107 769 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 CMPK1P30085 196 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 RPA3P35244 121 aaPredicted RBP15.53■□□□□ 0.08
LSM4-206ENST00000600289 DLSTP36957 453 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 AP1S2P56377 157 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 ABATP80404 500 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 NFKB2Q00653 900 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 MC1RQ01726 317 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 POU4F1Q01851 419 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 RELAQ04206 551 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 GPS2Q13227 327 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 ICE2Q659A1 982 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 TLDC1Q6P9B6 456 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 RNF44Q7L0R7 432 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 FAM20CQ8IXL6 584 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 NKAPQ8N5F7 415 aaKnown RBP15.53■□□□□ 0.08
LSM4-206ENST00000600289 EXD3Q8N9H8 876 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 N4BP2L2Q92802 583 aaPredicted RBP15.53■□□□□ 0.08
LSM4-206ENST00000600289 GPR22Q99680 433 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 MIPEPQ99797 713 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 GPR87Q9BY21 358 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 FUT8Q9BYC5 575 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 PCMTD2Q9NV79 361 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 EURLQ9NYK6 297 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 STOX2Q9P2F5 926 aaPredicted RBP15.53■□□□□ 0.08
LSM4-206ENST00000600289 TXNDC16Q9P2K2 825 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 KCND3Q9UK17 655 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 CROTQ9UKG9 612 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 SRPK3Q9UPE1 567 aa15.53■□□□□ 0.08
LSM4-206ENST00000600289 NUP210LQ5VU65 1888 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 DOPEY1Q5JWR5 2465 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 MEN1O00255 615 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 ZSCAN9O15535 394 aaPredicted RBP15.52■□□□□ 0.08
LSM4-206ENST00000600289 ZNF749O43361 778 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 KRT38O76015 456 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 SYF2O95926 243 aaKnown RBP15.52■□□□□ 0.08
LSM4-206ENST00000600289 CCND1P24385 295 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 ECHS1P30084 290 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 TAS2R39P59534 338 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 PRDX1Q06830 199 aaKnown RBP15.52■□□□□ 0.08
LSM4-206ENST00000600289 DNASE1L3Q13609 305 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 DEFB110Q30KQ9 67 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 KBTBD12Q3ZCT8 623 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 ZNF385CQ66K41 422 aaPredicted RBP15.52■□□□□ 0.08
LSM4-206ENST00000600289 ZNF425Q6IV72 752 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 RHBDD2Q6NTF9 364 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 SUSD1Q6UWL2 747 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 SBSNQ6UWP8 590 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 TMEM207Q6UWW9 146 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 SYTL1Q8IYJ3 562 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 PROKR1Q8TCW9 393 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 TSPAN17Q96FV3 270 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 SLC6A20Q9NP91 592 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 KLHL20Q9Y2M5 609 aa15.52■□□□□ 0.08
LSM4-206ENST00000600289 CREBBPQ92793 2442 aa15.52■□□□□ 0.07
LSM4-206ENST00000600289 FITM1A5D6W6 292 aa15.51■□□□□ 0.07
LSM4-206ENST00000600289 SRPX2O60687 465 aaPredicted RBP15.51■□□□□ 0.07
LSM4-206ENST00000600289 KLK3P07288 261 aaPredicted RBP15.51■□□□□ 0.07
LSM4-206ENST00000600289 RAB40ALP0C0E4 278 aa15.51■□□□□ 0.07
LSM4-206ENST00000600289 HIST1H2AGP0C0S8 130 aaPredicted RBP15.51■□□□□ 0.07
LSM4-206ENST00000600289 HIST1H2ADP20671 130 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms