RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CES5AQ6NT32 575 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 LILRA6Q6PI73 481 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 AGTRAPQ6RW13 159 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 PATL1Q86TB9 770 aaKnown RBP11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 THOC6Q86W42 341 aaKnown RBP11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SLC44A2Q8IWA5 706 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 TMEM132CQ8N3T6 1108 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 RASGEF1AQ8N9B8 481 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 ASB11Q8WXH4 323 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 DGCR6LQ9BY27 220 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 SEZ6LQ9BYH1 1024 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 TBC1D23Q9NUY8 699 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 PAIP2BQ9ULR5 123 aaKnown RBP11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 INSL6Q9Y581 213 aa11.2□□□□□ -0.62
ARHGEF1-220ENST00000600274 A0A1W2PPW3 197 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 TBC1D3BA6NDS4 549 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 FPGTO14772 594 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 TGFB1P01137 390 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ATXN8OSP0DMR3 200 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 CDH1P12830 882 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 GPR1P46091 355 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 BNIP3Q12983 259 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 DOC2AQ14183 400 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 NOXRED1Q6NXP6 359 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ERAP2Q6P179 960 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 C1orf52Q8N6N3 182 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 MRPL43Q8N983 215 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 FOPNLQ96NB1 174 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 SELENONQ9NZV5 590 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 PPT2Q9UMR5 302 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 COL4A6Q14031 1691 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ANAPC1Q9H1A4 1944 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 MGAT4DA6NG13 374 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 MAGEB17A8MXT2 336 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 H3BM21 787 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 AREL1O15033 823 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 LILRB3O75022 631 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 OPN1SWP03999 348 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 CATP04040 527 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 IL6P05231 212 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 RAP2AP10114 183 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 CAPGP40121 348 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 DHCR24Q15392 516 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ATP6AP1Q15904 470 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ABRAXAS1Q6UWZ7 409 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 VTCN1Q7Z7D3 282 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 MMAAQ8IVH4 418 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 MSRB3Q8IXL7 192 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 OR4K1Q8NGD4 311 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 MAL2Q969L2 176 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 LRRC3BQ96PB8 259 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 SLC12A9Q9BXP2 914 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ANKRD60Q9BZ19 345 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 RIBC2Q9H4K1 309 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 RMND5AQ9H871 391 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 TRPS1Q9UHF7 1281 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 RAPGEFL1Q9UHV5 662 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 GFRA2O00451 464 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 DLGAP1O14490 977 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 CREG1O75629 220 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 RASAL1O95294 804 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 C8GP07360 202 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 GGT1P19440 569 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ARSFP54793 590 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 TXNL4AP83876 142 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 USP39Q53GS9 565 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 COQ5Q5HYK3 327 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 CATSPEREQ5SY80 951 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 PARS2Q7L3T8 475 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 C11orf96Q7Z7L8 435 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 METTL3Q86U44 580 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 BPIFB6Q8NFQ5 453 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 FRS2Q8WU20 508 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 NXPE3Q969Y0 559 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ZNF641Q96N77 438 aaPredicted RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 UGT2B28Q9BY64 529 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 SLC2A11Q9BYW1 496 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 TOR3AQ9H497 397 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 RC3H2Q9HBD1 1191 aaKnown RBP11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 CCL27Q9Y4X3 112 aa11.19□□□□□ -0.62
ARHGEF1-220ENST00000600274 ACOX3O15254 700 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 TULP3O75386 442 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 FTH1P02794 183 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 CDH2P19022 906 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 SOAT1P35610 550 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 GRIK2Q13002 908 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 MAPK11Q15759 364 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 BRAT1Q6PJG6 821 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 GET4Q7L5D6 327 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 NECAB2Q7Z6G3 386 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 MICU2Q8IYU8 434 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 CBARPQ8N350 705 aaPredicted RBP11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 GANCQ8TET4 914 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 TSPEARQ8WU66 669 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 NTMT1Q9BV86 223 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 OR51B5Q9H339 312 aa11.18□□□□□ -0.62
ARHGEF1-220ENST00000600274 RUBCNLQ9H714 662 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms