RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TRIM54Q9BYV2 358 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 ZMYND15Q9H091 742 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 VPS11Q9H270 941 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 PPCSQ9HAB8 311 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 SLC39A1Q9NY26 324 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 FOXJ2Q9P0K8 574 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 TBK1Q9UHD2 729 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 TAC3Q9UHF0 121 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 PTBP2Q9UKA9 531 aaKnown RBP13.22□□□□□ -0.29
VRK3-219ENST00000600137 TLK1Q9UKI8 766 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 PILRAQ9UKJ1 303 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 ACSL6Q9UKU0 697 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 PCDHGA7Q9Y5G6 932 aa13.22□□□□□ -0.29
VRK3-219ENST00000600137 IQANK1A0A1B0GTG1 560 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 ZNF839A8K0R7 811 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 TARM1B6A8C7 271 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 MAP2K7O14733 419 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 KLK8O60259 260 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 TIAF1O95411 115 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 ANXA5P08758 320 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 SLC5A2P31639 672 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 GLRBP48167 497 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 ERVPABLB-1P60509 514 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 GPR19Q15760 415 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 FAM83EQ2M2I3 478 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 PTCHD3Q3KNS1 767 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 TBC1D25Q3MII6 688 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 TECRLQ5HYJ1 363 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 LGSNQ5TDP6 509 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 ICE2Q659A1 982 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 TAOK1Q7L7X3 1001 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 PAQR7Q86WK9 346 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 FAM129CQ86XR2 697 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 PDPRQ8NCN5 879 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 TCTN2Q96GX1 697 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 OR6C1Q96RD1 312 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 DDA1Q9BW61 102 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 ROPN1BQ9BZX4 212 aaPredicted RBP13.21□□□□□ -0.29
VRK3-219ENST00000600137 ROPN1Q9HAT0 212 aaPredicted RBP13.21□□□□□ -0.29
VRK3-219ENST00000600137 PDE7BQ9NP56 450 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 ENAMQ9NRM1 1142 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 FGF21Q9NSA1 209 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 CUEDC1Q9NWM3 386 aaPredicted RBP13.21□□□□□ -0.29
VRK3-219ENST00000600137 AKAP7Q9P0M2 348 aaPredicted RBP13.21□□□□□ -0.29
VRK3-219ENST00000600137 ASB1Q9Y576 335 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 AK5Q9Y6K8 562 aa13.21□□□□□ -0.29
VRK3-219ENST00000600137 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
VRK3-219ENST00000600137 MAP1BP46821 2468 aaKnown RBP13.21□□□□□ -0.29
VRK3-219ENST00000600137 CCDC189A1A4V9 331 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 CCDC151A5D8V7 595 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 UBXN8O00124 270 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 KERAO60938 352 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 CDH16O75309 829 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 RPA3P35244 121 aaPredicted RBP13.2□□□□□ -0.3
VRK3-219ENST00000600137 GDF5P43026 501 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 GCGRP47871 477 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 IL11RAQ14626 422 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 TAF1BQ53T94 588 aaPredicted RBP13.2□□□□□ -0.3
VRK3-219ENST00000600137 FBXO48Q5FWF7 155 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 LCTLQ6UWM7 567 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 KDF1Q8NAX2 398 aaPredicted RBP13.2□□□□□ -0.3
VRK3-219ENST00000600137 OR1L3Q8NH93 324 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 ACMSDQ8TDX5 336 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 ATL1Q8WXF7 558 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 ESAMQ96AP7 390 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 ZNF578Q96N58 590 aaPredicted RBP13.2□□□□□ -0.3
VRK3-219ENST00000600137 ZNF285Q96NJ3 590 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 PLCD4Q9BRC7 762 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 DPH7Q9BTV6 452 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 CCDC177Q9NQR7 707 aaPredicted RBP13.2□□□□□ -0.3
VRK3-219ENST00000600137 LGALS13Q9UHV8 139 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 PLAAQ9Y263 795 aa13.2□□□□□ -0.3
VRK3-219ENST00000600137 NCF1BA6NI72 391 aaPredicted RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 NCF1CA8MVU1 366 aaPredicted RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 POLR1CO15160 346 aaPredicted RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 PRAMEF4O60810 478 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 PYGBP11216 843 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 NCF1P14598 390 aaPredicted RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 ZNF28P17035 718 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 EPORP19235 508 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 RBMS1P29558 406 aaKnown RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 CMPK1P30085 196 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 HNMTP50135 292 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 RAB15P59190 212 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 ABATP80404 500 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 ACY1Q03154 408 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 RELAQ04206 551 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 SLC18A2Q05940 514 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 FOXM1Q08050 763 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 TUBB3Q13509 450 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.19□□□□□ -0.3
VRK3-219ENST00000600137 PRAMEF17Q5VTA0 474 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 PRAMEF9Q5VWM5 478 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 PRAMEF13Q5VWM6 474 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 SULT1C3Q6IMI6 304 aa13.19□□□□□ -0.3
VRK3-219ENST00000600137 CAPN13Q6MZZ7 669 aaPredicted RBP13.19□□□□□ -0.3
VRK3-219ENST00000600137 PWWP2BQ6NUJ5 590 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms