RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SUSD1Q6UWL2 747 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 RBM44Q6ZP01 1051 aaKnown RBP18.18■□□□□ 0.5
CCDC9-205ENST00000600117 B3GNT8Q7Z7M8 397 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 BANPQ8N9N5 519 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 OR56A3Q8NH54 315 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 EXT2Q93063 718 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 ZDHHC12Q96GR4 267 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 SCYL1Q96KG9 808 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 PPM1MQ96MI6 270 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 TGM7Q96PF1 710 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 MRPL57Q9BQC6 102 aaKnown RBP18.18■□□□□ 0.5
CCDC9-205ENST00000600117 ATG10Q9H0Y0 220 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 TMBIM4Q9HC24 238 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 NUDT4Q9NZJ9 180 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 SEMA5BQ9P283 1151 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 DCDC2Q9UHG0 476 aa18.18■□□□□ 0.5
CCDC9-205ENST00000600117 SNRNP200O75643 2136 aaKnown RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 PABPN1LA6NDY0 278 aaKnown RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 NCF1BA6NI72 391 aaPredicted RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 NCF1CA8MVU1 366 aaPredicted RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 MAP2K7O14733 419 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 TAPBPO15533 448 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 KIF1CO43896 1103 aaKnown RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 KLK8O60259 260 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 MYZAPP0CAP1 466 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 THRAP10827 490 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 NCF1P14598 390 aaPredicted RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 MPSTP25325 297 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 PSMB5P28074 263 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 OAS2P29728 719 aaKnown RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 PRDX3P30048 256 aaKnown RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 TBPL1P62380 186 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 NAE1Q13564 534 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 SLC5A12Q1EHB4 618 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 C18orf21Q32NC0 220 aaPredicted RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 SULT1C3Q6IMI6 304 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 SPESP1Q6UW49 350 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 FAM92BQ6ZTR7 304 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 EXOC3L1Q86VI1 746 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 KLHDC8AQ8IYD2 350 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 ATL1Q8WXF7 558 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 APOPT1Q96IL0 206 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 ZNF578Q96N58 590 aaPredicted RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 RUFY1Q96T51 708 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 CD180Q99467 661 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 EGFL8Q99944 293 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 TMEM79Q9BSE2 394 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 SGPP1Q9BX95 441 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 ZMYND15Q9H091 742 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 MRPL46Q9H2W6 279 aaKnown RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 CENPHQ9H3R5 247 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 ZNF446Q9NWS9 450 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 CD274Q9NZQ7 290 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 SENP1Q9P0U3 644 aa18.17■□□□□ 0.5
CCDC9-205ENST00000600117 PTBP2Q9UKA9 531 aaKnown RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 TLN1Q9Y490 2541 aaKnown RBP18.17■□□□□ 0.5
CCDC9-205ENST00000600117 TLCD2A6NGC4 264 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 SYCE1LA8MT33 242 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 ISM1B1AKI9 464 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 SUPT3HB4E1H0 165 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 COPEO14579 308 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 SUPT3HO75486 399 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 WISP1O95388 367 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 CCKBRP32239 447 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 GGT5P36269 586 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 SLC6A12P48065 614 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 HNMTP50135 292 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 ARHGAP40Q5TG30 622 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 PRSS42Q7Z5A4 293 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 ARHGAP22Q7Z5H3 698 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 TRIM73Q86UV7 250 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 OR2A1Q8NGT9 310 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 SLC22A18Q96BI1 424 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 CCDC74BQ96LY2 380 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 MAP3K3Q99759 626 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 PITPNM3Q9BZ71 974 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 CPNE5Q9HCH3 593 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 CPSF2Q9P2I0 782 aaKnown RBP18.16■□□□□ 0.5
CCDC9-205ENST00000600117 KLHL3Q9UH77 587 aa18.16■□□□□ 0.5
CCDC9-205ENST00000600117 PCM1Q15154 2024 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 TYROBPO43914 113 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 PROCP04070 461 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 ANKRD34CP0C6C1 535 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 CCT5P48643 541 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 INHBCP55103 352 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 YBX1P67809 324 aaKnown RBP18.15■□□□□ 0.5
CCDC9-205ENST00000600117 LY6DQ14210 128 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 ISXQ2M1V0 245 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 PTCHD3Q3KNS1 767 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 FBXO48Q5FWF7 155 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 SNAP47Q5SQN1 464 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 FAM20CQ8IXL6 584 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 TCAIMQ8N3R3 496 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 TTC9Q92623 222 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 ALKBH8Q96BT7 664 aaKnown RBP18.15■□□□□ 0.5
CCDC9-205ENST00000600117 PYCR2Q96C36 320 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 TLCD1Q96CP7 247 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 NAF1Q96HR8 494 aaKnown RBP18.15■□□□□ 0.5
CCDC9-205ENST00000600117 TMEM74Q96NL1 305 aa18.15■□□□□ 0.5
CCDC9-205ENST00000600117 SMC6Q96SB8 1091 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms