RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 OR8J3Q8NGG0 315 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 ATL1Q8WXF7 558 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 TBCDQ9BTW9 1192 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 THUMPD3Q9BV44 507 aaKnown RBP14.01□□□□□ -0.17
VRK3-217ENST00000599538 VCXQ9H320 206 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 SLC28A3Q9HAS3 691 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 RAB26Q9ULW5 256 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 ERVK-11Q9UQG0 969 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 PCDHB3Q9Y5E6 796 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 PRUNE2Q8WUY3 3088 aa14.01□□□□□ -0.17
VRK3-217ENST00000599538 NPIPB8E9PQR5 432 aa14□□□□□ -0.17
VRK3-217ENST00000599538 UGDHO60701 494 aa14□□□□□ -0.17
VRK3-217ENST00000599538 PRPS2P11908 318 aa14□□□□□ -0.17
VRK3-217ENST00000599538 NPPBP16860 134 aa14□□□□□ -0.17
VRK3-217ENST00000599538 IL10P22301 178 aa14□□□□□ -0.17
VRK3-217ENST00000599538 GRIA2P42262 883 aa14□□□□□ -0.17
VRK3-217ENST00000599538 SEC13P55735 322 aa14□□□□□ -0.17
VRK3-217ENST00000599538 CYP4F3Q08477 520 aa14□□□□□ -0.17
VRK3-217ENST00000599538 WSCD2Q2TBF2 565 aa14□□□□□ -0.17
VRK3-217ENST00000599538 RUNDC3AQ59EK9 446 aa14□□□□□ -0.17
VRK3-217ENST00000599538 FOXB2Q5VYV0 432 aa14□□□□□ -0.17
VRK3-217ENST00000599538 GRHL2Q6ISB3 625 aa14□□□□□ -0.17
VRK3-217ENST00000599538 DSG4Q86SJ6 1040 aa14□□□□□ -0.17
VRK3-217ENST00000599538 TMPRSS11BQ86T26 416 aa14□□□□□ -0.17
VRK3-217ENST00000599538 KLHDC8AQ8IYD2 350 aa14□□□□□ -0.17
VRK3-217ENST00000599538 C2orf73Q8N5S3 287 aaPredicted RBP14□□□□□ -0.17
VRK3-217ENST00000599538 FAM86B1Q8N7N1 296 aa14□□□□□ -0.17
VRK3-217ENST00000599538 OR7A2PQ8NGA2 310 aa14□□□□□ -0.17
VRK3-217ENST00000599538 HIC2Q96JB3 615 aa14□□□□□ -0.17
VRK3-217ENST00000599538 ZNF597Q96LX8 424 aa14□□□□□ -0.17
VRK3-217ENST00000599538 IL17FQ96PD4 163 aa14□□□□□ -0.17
VRK3-217ENST00000599538 CDCA3Q99618 268 aaPredicted RBP14□□□□□ -0.17
VRK3-217ENST00000599538 ZDHHC5Q9C0B5 715 aa14□□□□□ -0.17
VRK3-217ENST00000599538 ZCCHC2Q9C0B9 1178 aaKnown RBP14□□□□□ -0.17
VRK3-217ENST00000599538 CARS2Q9HA77 564 aaKnown RBP14□□□□□ -0.17
VRK3-217ENST00000599538 SGK2Q9HBY8 427 aa14□□□□□ -0.17
VRK3-217ENST00000599538 MBNL1Q9NR56 388 aaKnown RBP14□□□□□ -0.17
VRK3-217ENST00000599538 SPATA6Q9NWH7 488 aaPredicted RBP14□□□□□ -0.17
VRK3-217ENST00000599538 CNOT11Q9UKZ1 510 aaKnown RBP14□□□□□ -0.17
VRK3-217ENST00000599538 PLAGL1Q9UM63 463 aa14□□□□□ -0.17
VRK3-217ENST00000599538 SERTM1A2A2V5 107 aa14□□□□□ -0.17
VRK3-217ENST00000599538 HNRNPRO43390 633 aaKnown RBP14□□□□□ -0.17
VRK3-217ENST00000599538 LAMP2P13473 410 aa14□□□□□ -0.17
VRK3-217ENST00000599538 ACADLP28330 430 aa14□□□□□ -0.17
VRK3-217ENST00000599538 PTPN6P29350 595 aa14□□□□□ -0.17
VRK3-217ENST00000599538 S100A3P33764 101 aa14□□□□□ -0.17
VRK3-217ENST00000599538 CST6Q15828 149 aa14□□□□□ -0.17
VRK3-217ENST00000599538 OR4F3Q6IEY1 312 aa14□□□□□ -0.17
VRK3-217ENST00000599538 PNCKQ6P2M8 343 aa14□□□□□ -0.17
VRK3-217ENST00000599538 SLCO4C1Q6ZQN7 724 aa14□□□□□ -0.17
VRK3-217ENST00000599538 PRR23BQ6ZRT6 265 aa14□□□□□ -0.17
VRK3-217ENST00000599538 ZBTB49Q6ZSB9 765 aa14□□□□□ -0.17
VRK3-217ENST00000599538 ZNF548Q8NEK5 533 aaPredicted RBP14□□□□□ -0.17
VRK3-217ENST00000599538 OR7G3Q8NG95 312 aa14□□□□□ -0.17
VRK3-217ENST00000599538 OR2L2Q8NH16 312 aa14□□□□□ -0.17
VRK3-217ENST00000599538 KLK6Q92876 244 aa14□□□□□ -0.17
VRK3-217ENST00000599538 MRPL38Q96DV4 380 aaKnown RBP14□□□□□ -0.17
VRK3-217ENST00000599538 C11orf24Q96F05 449 aaPredicted RBP14□□□□□ -0.17
VRK3-217ENST00000599538 COX14Q96I36 57 aa14□□□□□ -0.17
VRK3-217ENST00000599538 LINC00615Q96LM1 132 aaPredicted RBP14□□□□□ -0.17
VRK3-217ENST00000599538 CENPKQ9BS16 269 aa14□□□□□ -0.17
VRK3-217ENST00000599538 SPNS1Q9H2V7 528 aa14□□□□□ -0.17
VRK3-217ENST00000599538 MUC13Q9H3R2 512 aa14□□□□□ -0.17
VRK3-217ENST00000599538 VPS29Q9UBQ0 182 aa14□□□□□ -0.17
VRK3-217ENST00000599538 ANAPC2Q9UJX6 822 aa14□□□□□ -0.17
VRK3-217ENST00000599538 BRWD1Q9NSI6 2320 aa14□□□□□ -0.17
VRK3-217ENST00000599538 DNAH14Q0VDD8 3507 aa14□□□□□ -0.17
VRK3-217ENST00000599538 CKAP5Q14008 2032 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 A0A1W2PP55 124 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 H0YIV9 168 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 DLGAP1O14490 977 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 YY2O15391 372 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 PCDH8O95206 1070 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 GPIP06744 558 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 PIM1P11309 404 aaPredicted RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 PCNAP12004 261 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 HOXB9P17482 250 aaPredicted RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 GGT1P19440 569 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 CHN2P52757 468 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 MEF2AQ02078 507 aaPredicted RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 SLC14A1Q13336 389 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 GTF2H3Q13889 308 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 UGT8Q16880 541 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 ANKRD26P1Q6NSI1 321 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 KIAA1211LQ6NV74 962 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 TMEM184AQ6ZMB5 413 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 ZNF551Q7Z340 670 aaPredicted RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 GALNT13Q8IUC8 556 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 LRRC56Q8IYG6 542 aaPredicted RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 CBR4Q8N4T8 237 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 ZNF513Q8N8E2 541 aaPredicted RBP13.99□□□□□ -0.17
VRK3-217ENST00000599538 GOLM1Q8NBJ4 401 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 OR2T12Q8NG77 320 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 HUS1BQ8NHY5 278 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 FCRL1Q96LA6 429 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 NSMCE2Q96MF7 247 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 HHIPQ96QV1 700 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 SLC6A17Q9H1V8 727 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 CLEC1BQ9P126 229 aa13.99□□□□□ -0.17
VRK3-217ENST00000599538 BTBD3Q9Y2F9 522 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms