RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 INSCQ1MX18 579 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 KLHL38Q2WGJ6 581 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 DCAF10Q5QP82 559 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 ZNF648Q5T619 568 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 ZNF470Q6ECI4 717 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 MRNIPQ6NTE8 343 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 FAM180AQ6UWF9 173 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 SERPINA9Q86WD7 417 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 DENND6AQ8IWF6 608 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 DSELQ8IZU8 1212 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 DDHD1Q8NEL9 900 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 GABPB2Q8TAK5 448 aaPredicted RBP13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 CHTF18Q8WVB6 975 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 CDKL2Q92772 493 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 GLYATL1Q969I3 302 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 RELTQ969Z4 430 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 ULK4Q96C45 1275 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 TMEM109Q9BVC6 243 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 OLAHQ9NV23 265 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 NSMCE4AQ9NXX6 385 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 SLC17A6Q9P2U8 582 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 FBXO5Q9UKT4 447 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 PSAT1Q9Y617 370 aa13.41□□□□□ -0.26
SHKBP1-218ENST00000598907 MYO7BQ6PIF6 2116 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 CCL21O00585 134 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 AHSGP02765 367 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 CAPN1P07384 714 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 ACRV1P26436 265 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 RPL10P27635 214 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 TSFMP43897 325 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 CASP8Q14790 479 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 NCF4Q15080 339 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 DBN1Q16643 649 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 SDCCAG8Q86SQ7 713 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 LDB1Q86U70 411 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 BPHLQ86WA6 291 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 LRRC6Q86X45 466 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 CEP97Q8IW35 865 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 SYTL1Q8IYJ3 562 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 SLC44A1Q8WWI5 657 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 ZNF501Q96CX3 271 aaPredicted RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 CXorf40BQ96DE9 158 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 FER1L6-AS2Q96M78 137 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 SLX1AQ9BQ83 275 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 CCDC77Q9BR77 488 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 PPCSQ9HAB8 311 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 PPANQ9NQ55 473 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 POT1Q9NUX5 634 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 INTS10Q9NVR2 710 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 SOHLH2Q9NX45 425 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 ZDHHC3Q9NYG2 299 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 CRLS1Q9UJA2 301 aa13.4□□□□□ -0.26
SHKBP1-218ENST00000598907 EXOC1LA0A1B0GW35 172 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 PEX12O00623 359 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 HAUS5O94927 633 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 TTPAP49638 278 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 CSE1LP55060 971 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ADARP55265 1226 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 HSD11B2P80365 405 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 MPP1Q00013 466 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ABRQ12979 859 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ITIH4Q14624 930 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF169Q14929 603 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 RASA2Q15283 850 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF789Q5FWF6 425 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 LDLRAP1Q5SW96 308 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 GPRC6AQ5T6X5 926 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ADGRD1Q6QNK2 874 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 LRIG3Q6UXM1 1119 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 PACS1Q6VY07 963 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 TAS2R42Q7RTR8 314 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 HDXQ7Z353 690 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 TDRPQ86YL5 185 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 PPM1NQ8N819 430 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 OR2W6PQ8NHA6 318 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 DNAJB14Q8TBM8 379 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 DCAKDQ8WVC6 231 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 LPGAT1Q92604 370 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 MAGEB10Q96LZ2 347 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ZIM3Q96PE6 472 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 GBP5Q96PP8 586 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 CPNE1Q99829 537 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 TMUB1Q9BVT8 246 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ROPN1BQ9BZX4 212 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 P2RY12Q9H244 342 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 RMI1Q9H9A7 625 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 VIPAS39Q9H9C1 493 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ROPN1Q9HAT0 212 aaPredicted RBP13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 SLC40A1Q9NP59 571 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 EURLQ9NYK6 297 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 EPHA6Q9UF33 1036 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 SLC24A2Q9UI40 661 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF180Q9UJW8 692 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 PADI2Q9Y2J8 665 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 PCDHGB6Q9Y5F9 930 aa13.39□□□□□ -0.27
SHKBP1-218ENST00000598907 UBA6A0AVT1 1052 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms