RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 KRT6AP02538 564 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 KRT6BP04259 564 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 CAPN1P07384 714 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 CHRM5P08912 532 aaPredicted RBP14.92□□□□□ -0.02
UPF1-206ENST00000598471 PRDX3P30048 256 aaKnown RBP14.92□□□□□ -0.02
UPF1-206ENST00000598471 KRT6CP48668 564 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 LAPTM5Q13571 262 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 KIR2DS3Q14952 304 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 TBCCQ15814 346 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 HIST2H2ACQ16777 129 aaPredicted RBP14.92□□□□□ -0.02
UPF1-206ENST00000598471 HIST2H2AA3Q6FI13 130 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 ARMC6Q6NXE6 501 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 ZCCHC8Q6NZY4 707 aaKnown RBP14.92□□□□□ -0.02
UPF1-206ENST00000598471 ASCL5Q7RTU5 278 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 OOSP2Q86WS3 158 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 SLC25A45Q8N413 288 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 DCBLD1Q8N8Z6 715 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 GPR156Q8NFN8 814 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 TWIST2Q8WVJ9 160 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 STON2Q8WXE9 905 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 JPH3Q8WXH2 748 aaPredicted RBP14.92□□□□□ -0.02
UPF1-206ENST00000598471 NEIL2Q969S2 332 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 PTCD3Q96EY7 689 aaKnown RBP14.92□□□□□ -0.02
UPF1-206ENST00000598471 EFCAB11Q9BUY7 163 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 ACAT2Q9BWD1 397 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 GTPBP2Q9BX10 602 aaKnown RBP14.92□□□□□ -0.02
UPF1-206ENST00000598471 TMEM120AQ9BXJ8 343 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 PELI2Q9HAT8 420 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 ZNF225Q9UK10 706 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 SNX6Q9UNH7 406 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 ARL2BPQ9Y2Y0 163 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 ENTPD2Q9Y5L3 495 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 CACNA1HO95180 2353 aa14.92□□□□□ -0.02
UPF1-206ENST00000598471 A0A1W2PPV9 198 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 OR6C74A6NCV1 312 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 RHPN2P1A8MT19 583 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 C2orf74A8MZ97 194 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 ISM1B1AKI9 464 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 DIAPH2O60879 1101 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 C1GALT1C1LP0DN25 315 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 JUPP14923 745 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 CXCR2P25025 360 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 CMPK1P30085 196 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 CASP2P42575 452 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 SF3A3Q12874 501 aaKnown RBP eCLIP14.91□□□□□ -0.025e-7■■■□□ 14.8
UPF1-206ENST00000598471 DOC2AQ14183 400 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 NAA25Q14CX7 972 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 ICE2Q659A1 982 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 ATG9BQ674R7 924 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 GRHL2Q6ISB3 625 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 NXPE4Q6UWF7 544 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 SLCO4C1Q6ZQN7 724 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 ACAD11Q709F0 780 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 DDIASQ8IXT1 998 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 LMNTD1Q8N9Z9 388 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 KYQ8NBH2 561 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 OR6C4Q8NGE1 309 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 OR10G6Q8NH81 332 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 SAP25Q8TEE9 199 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 C10orf82Q8WW14 230 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 UBE2E3Q969T4 207 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 REPS1Q96D71 796 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 WDR34Q96EX3 536 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 SEC16BQ96JE7 1060 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 KCNA7Q96RP8 456 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 SLC38A3Q99624 504 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 NUF2Q9BZD4 464 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 TNFRSF12AQ9NP84 129 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 FSCN3Q9NQT6 498 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.91□□□□□ -0.02
UPF1-206ENST00000598471 RNF11Q9Y3C5 154 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 TIMM22Q9Y584 194 aa14.91□□□□□ -0.02
UPF1-206ENST00000598471 MUC6Q6W4X9 2439 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 A0A1B0GTL3 188 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 GSAPA4D1B5 854 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 WFS1O76024 890 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 FKBP9O95302 570 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 RETP07949 1114 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 CDH1P12830 882 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 ENGP17813 658 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 HRH2P25021 359 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 CCR8P51685 355 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 EPHA4P54764 986 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 INHBCP55103 352 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 FOXA1P55317 472 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 BTKQ06187 659 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 ZNF33BQ06732 778 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 PRDX1Q06830 199 aaKnown RBP14.9□□□□□ -0.02
UPF1-206ENST00000598471 IFT88Q13099 833 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 SF1Q15637 639 aaKnown RBP14.9□□□□□ -0.02
UPF1-206ENST00000598471 CPSF6Q16630 551 aaKnown RBP eCLIP14.9□□□□□ -0.02
UPF1-206ENST00000598471 INAVAQ3KP66 663 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 C10orf62Q5T681 223 aaPredicted RBP14.9□□□□□ -0.02
UPF1-206ENST00000598471 EPGNQ6UW88 154 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 KANSL1Q7Z3B3 1105 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 GATAD2AQ86YP4 633 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 SFTPA2Q8IWL1 248 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 ADGRF3Q8IZF5 1079 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 KRT78Q8N1N4 520 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 TBC1D19Q8N5T2 526 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms