RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 FRMPD2BQ6IN97 320 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 FBXO42Q6P3S6 717 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 PPP1R32Q7Z5V6 425 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 KCNMB4Q86W47 210 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 C2CD4AQ8NCU7 369 aaPredicted RBP17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 CD200R1Q8TD46 325 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 GPR21Q99679 349 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 EBNA1BP2Q99848 306 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 ZFYVE21Q9BQ24 234 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 PLCD4Q9BRC7 762 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 AARSD1Q9BTE6 412 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 DPH7Q9BTV6 452 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 SLC6A20Q9NP91 592 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 MRPS30Q9NP92 439 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 P4HTMQ9NXG6 502 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 GPR83Q9NYM4 423 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 ASIC3Q9UHC3 531 aa17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 NXT1Q9UKK6 140 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 TNRC6AQ8NDV7 1962 aaKnown RBP17.15■□□□□ 0.34
CHMP2A-203ENST00000597209 A0A0J9YVX5 310 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 HYKKA2RU49 373 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 E7ENX8 843 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 ZBTB14O43829 449 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 VPS26AO75436 327 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 MMP11P24347 488 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 IVDP26440 423 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 RPA3P35244 121 aaPredicted RBP17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 SKIV2L2P42285 1042 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 ABATP80404 500 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 MPP1Q00013 466 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 TAP2Q03519 686 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 PRDX1Q06830 199 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 CUL1Q13616 776 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 NKG7Q16617 165 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 COLEC12Q5KU26 742 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 SPANXN3Q5MJ09 141 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 LRRC8EQ6NSJ5 796 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 UGT3A1Q6NUS8 523 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 PRMT9Q6P2P2 845 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 SUSD1Q6UWL2 747 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 SYDE1Q6ZW31 735 aaPredicted RBP17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 COX15Q7KZN9 410 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 PAQR7Q86WK9 346 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 CLEC1AQ8NC01 280 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 ZNF480Q8WV37 535 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 RUNDC3BQ96NL0 473 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 SPSB2Q99619 263 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 ACAT2Q9BWD1 397 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 IARS2Q9NSE4 1012 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 UTP6Q9NYH9 597 aaKnown RBP17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 CCDC88CQ9P219 2028 aa17.14■□□□□ 0.33
CHMP2A-203ENST00000597209 PCM1Q15154 2024 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 ANKRD12Q6UB98 2062 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 LOC105369274A0A096LPK9 316 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 LOC102723532A0A0G2JNH3 316 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 A6NL46 340 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 VSTM2BA6NLU5 285 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 AGPSO00116 658 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 SMAPO00193 183 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 SORBS2O94875 1100 aaKnown RBP17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 SLC16A8O95907 504 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 F7P08709 466 aaPredicted RBP17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 MLLT10P55197 1068 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 YBX1P67809 324 aaKnown RBP17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 DHX9Q08211 1270 aaKnown RBP17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 PRTGQ2VWP7 1150 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 NADK2Q4G0N4 442 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 VWA5B1Q5TIE3 1220 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 ICE2Q659A1 982 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 ZNF425Q6IV72 752 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 KIAA0408Q6ZU52 694 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 GALNT7Q86SF2 657 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 CNTN4Q8IWV2 1026 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 LRRC56Q8IYG6 542 aaPredicted RBP17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 OR4N4Q8N0Y3 316 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 ZC3H7BQ9UGR2 993 aaKnown RBP17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 PLAAQ9Y263 795 aa17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 FLNBO75369 2602 aaKnown RBP17.13■□□□□ 0.33
CHMP2A-203ENST00000597209 IGKV1-8A0A0C4DH67 115 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 NRP2O60462 931 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 MYBPC3Q14896 1274 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 MORF4L2Q15014 288 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 MUM1Q2TAK8 710 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 MSS51Q4VC12 460 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 ATCAYQ86WG3 371 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 CREG2Q8IUH2 290 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 CPNE9Q8IYJ1 553 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 GALNT16Q8N428 558 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 PDLIM2Q96JY6 352 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 ZNF304Q9HCX3 659 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 ATP13A2Q9NQ11 1180 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 TAC3Q9UHF0 121 aa17.12■□□□□ 0.33
CHMP2A-203ENST00000597209 CLEC18AA5D8T8 446 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 TTLL8A6PVC2 850 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 H0YGG7 62 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 ERVK-10P10266 1014 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 OR1D4P47884 311 aa17.11■□□□□ 0.33
CHMP2A-203ENST00000597209 FOXL2P58012 376 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms