RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 CXADRP78310 365 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 TAP2Q03519 686 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 C19orf57Q0VDD7 668 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 NAE1Q13564 534 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 CSHL1Q14406 222 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 ARHGAP19Q14CB8 494 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 TSNQ15631 228 aaKnown RBP10.66□□□□□ -0.7
LIG1-211ENST00000596457 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.66□□□□□ -0.7
LIG1-211ENST00000596457 AGTRAPQ6RW13 159 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 CCDC81Q6ZN84 652 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 GPR155Q7Z3F1 870 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 BPHLQ86WA6 291 aaPredicted RBP10.66□□□□□ -0.7
LIG1-211ENST00000596457 GPR135Q8IZ08 494 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 OR2L3Q8NG85 312 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 HMGCLL1Q8TB92 370 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 EXT2Q93063 718 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 NKD1Q969G9 470 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 CLIP3Q96DZ5 547 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 DPH7Q9BTV6 452 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 ACSS3Q9H6R3 686 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 POPDC3Q9HBV1 291 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 CPNE5Q9HCH3 593 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 CCDC177Q9NQR7 707 aaPredicted RBP10.66□□□□□ -0.7
LIG1-211ENST00000596457 PILRAQ9UKJ1 303 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 ACSL6Q9UKU0 697 aa10.66□□□□□ -0.7
LIG1-211ENST00000596457 LAMA5O15230 3695 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 KALRNO60229 2985 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 A0A0J9YVX5 310 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 LOC101059948A0A1B0GTJ6 334 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 EXOC1LA0A1B0GW35 172 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 E7EQ34 232 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 NRP2O60462 931 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 OR2B3O76000 313 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 CCNDBP1O95273 360 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 DLGAP3O95886 979 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 EIF2S1P05198 315 aaKnown RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 CTSBP07858 339 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 ERGP11308 486 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 ITGA1P56199 1179 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 TMPRSS3P57727 454 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 TBPL1P62380 186 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 TLE3Q04726 772 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 ARHGAP40Q5TG30 622 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 PRAMEF13Q5VWM6 474 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 ICE2Q659A1 982 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 FAM199XQ6PEV8 388 aaPredicted RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 TRMT10CQ7L0Y3 403 aaKnown RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 TBC1D1Q86TI0 1168 aaPredicted RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 DTX1Q86Y01 620 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 MCATQ8IVS2 390 aaKnown RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 DNAJC22Q8N4W6 341 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 ZNF655Q8N720 491 aaPredicted RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 OR8K5Q8NH50 307 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 UBLCP1Q8WVY7 318 aaPredicted RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 ZUFSPQ96AP4 578 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 PYCR2Q96C36 320 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 PDLIM5Q96HC4 596 aaKnown RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 FCRL4Q96PJ5 515 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 CCNL2Q96S94 520 aaPredicted RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 PAFAH2Q99487 392 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 ANKZF1Q9H8Y5 726 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 ACTR5Q9H9F9 607 aaPredicted RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 SLC6A20Q9NP91 592 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 STARD5Q9NSY2 213 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 TLK1Q9UKI8 766 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 PLCL2Q9UPR0 1127 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 SSUH2Q9Y2M2 353 aa10.65□□□□□ -0.7
LIG1-211ENST00000596457 TMEM184BQ9Y519 407 aaPredicted RBP10.65□□□□□ -0.7
LIG1-211ENST00000596457 H7BY64 318 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 RIPK2O43353 540 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 ZNF749O43361 778 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 CPNE3O75131 537 aaKnown RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 KATNA1O75449 491 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 PRB1P04280 392 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 ANXA5P08758 320 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 ENO2P09104 434 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 LIFP15018 202 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 CD1DP15813 335 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 CRABP2P29373 138 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 TYK2P29597 1187 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 DLSTP36957 453 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 GABRA4P48169 554 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 VSX2P58304 361 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 IRF9Q00978 393 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 PRDX1Q06830 199 aaKnown RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 SLC29A2Q14542 456 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 C18orf21Q32NC0 220 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 ZC3H12BQ5HYM0 836 aaKnown RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 C1orf189Q5VU69 101 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 CAPN13Q6MZZ7 669 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 SBSNQ6UWP8 590 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 LRRC56Q8IYG6 542 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 ESX1Q8N693 406 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 SLC44A1Q8WWI5 657 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 MR1Q95460 341 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 KIAA1143Q96AT1 154 aaPredicted RBP10.64□□□□□ -0.71
LIG1-211ENST00000596457 NXNL1Q96CM4 212 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 WBP1Q96G27 269 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 PRAP1Q96NZ9 151 aa10.64□□□□□ -0.71
LIG1-211ENST00000596457 SELENOSQ9BQE4 189 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms