RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 NUAK1O60285 661 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 WBP4O75554 376 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 AKR1A1P14550 325 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 TIGD6Q17RP2 521 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 RNF219Q5W0B1 726 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 ZNF621Q6ZSS3 439 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 ZBTB2Q8N680 514 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 DNASE1L2Q92874 299 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 USP7Q93009 1102 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 EID2BQ96D98 161 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 HSH2DQ96JZ2 352 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 FAM193BQ96PV7 902 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 RUBCNLQ9H714 662 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 PRSS21Q9Y6M0 314 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 TAF4O00268 1085 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 MRPS14O60783 128 aaKnown RBP16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 F11P03951 625 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 GADD45AP24522 165 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 HMGCLP35914 325 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 CTSKP43235 329 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 TPRG1LQ5T0D9 272 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 HEATR4Q86WZ0 1026 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 ELMOD1Q8N336 334 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 FAM83FQ8NEG4 500 aaPredicted RBP16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 TBC1D20Q96BZ9 403 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 PPT2Q9UMR5 302 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 TESMINQ9Y4I5 508 aa16.91■□□□□ 0.3
ARHGEF1-213ENST00000595897 CLIC1O00299 241 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 C1QCP02747 245 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 PRPS2P11908 318 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 ENGP17813 658 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 EFNA1P20827 205 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 PTPN6P29350 595 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 KDELR2P33947 212 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 NR4A2P43354 598 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 KIR3DL1P43629 444 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 ELP6Q0PNE2 266 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 VMACQ2NL98 169 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 PRSS36Q5K4E3 855 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 UBE2UQ5VVX9 321 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 ENTHD1Q8IYW4 607 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 CLIP4Q8N3C7 705 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 BEND7Q8N7W2 519 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 Q8N9G6 341 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 FCGR1BQ92637 280 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 APOLD1Q96LR9 279 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 DPH2Q9BQC3 489 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 ITM2CQ9NQX7 267 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 DNMT3LQ9UJW3 386 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 ILVBLA1L0T0 632 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 METTL15A6NJ78 407 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 H3BNC9 293 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 KCNK2O95069 426 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 TCEA1P23193 301 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 ATP5C1P36542 298 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 PDE12Q6L8Q7 609 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 TUBA3EQ6PEY2 450 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 USP43Q70EL4 1123 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 UTS2BQ765I0 119 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 KIAA1958Q8N8K9 716 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 CDC26Q8NHZ8 85 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 CRISPLD1Q9H336 500 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 ARL15Q9NXU5 204 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 HECAQ9UBI9 543 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 KLHL3Q9UH77 587 aa16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 TDRD15B5MCY1 1934 aaKnown RBP16.9■□□□□ 0.3
ARHGEF1-213ENST00000595897 EPN2O95208 641 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 VIPP01282 170 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 SGSHP51688 502 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 DESI1Q6ICB0 168 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 SERPINA11Q86U17 422 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 FAM9CQ8IZT9 166 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 SKA2Q8WVK7 121 aaPredicted RBP16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 NELL1Q92832 810 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 SLC29A3Q9BZD2 475 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 PRM3Q9NNZ6 103 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 SIRT5Q9NXA8 310 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 SPATA7Q9P0W8 599 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 IFT52Q9Y366 437 aa16.89■□□□□ 0.3
ARHGEF1-213ENST00000595897 FPGTO14772 594 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 ANXA5P08758 320 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 COL6A1P12109 1028 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 SDC1P18827 310 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 ITGALP20701 1170 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 RHOAP61586 193 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 DUSP4Q13115 394 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 TTLL9Q3SXZ7 439 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 INO80DQ53TQ3 878 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 Q6ZPB1 254 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 KCNC2Q96PR1 638 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 SLX1AQ9BQ83 275 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 CRLS1Q9UJA2 301 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 VPS4AQ9UN37 437 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 PABPN1LA6NDY0 278 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 SCAMP3O14828 347 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 CPSF4O95639 269 aaKnown RBP16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 LRIT3Q3SXY7 679 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 ATXN7L2Q5T6C5 722 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 OR6K2Q8NGY2 324 aa16.89■□□□□ 0.29
ARHGEF1-213ENST00000595897 APH1BQ8WW43 257 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms