RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
SHKBP1-208ENST00000595726 HACD3Q9P035 362 aa13.11□□□□□ -0.31
SHKBP1-208ENST00000595726 STOX2Q9P2F5 926 aaPredicted RBP13.11□□□□□ -0.31
SHKBP1-208ENST00000595726 FKBPLQ9UIM3 349 aa13.11□□□□□ -0.31
SHKBP1-208ENST00000595726 NXT1Q9UKK6 140 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-208ENST00000595726 TDRKHQ9Y2W6 561 aaKnown RBP13.11□□□□□ -0.31
SHKBP1-208ENST00000595726 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 COL6A5A8TX70 2615 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 OR5H15A6NDH6 313 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 ADAM10O14672 748 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 WFS1O76024 890 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 SLCO2B1O94956 709 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 BMP10O95393 424 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 AGTP01019 485 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 ZGLP1P0C6A0 271 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 ITGAMP11215 1152 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 ATP1B2P14415 290 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 SHMT2P34897 504 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 ADRA1AP35348 466 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 CD151P48509 253 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 HSF1Q00613 529 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 LTBQ06643 244 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 SEL1L2Q5TEA6 688 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 DOLPP1Q86YN1 238 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 KLHDC8BQ8IXV7 354 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 C2orf73Q8N5S3 287 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 OR4K2Q8NGD2 314 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 SLC35B2Q8TB61 432 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 GPR137Q96N19 417 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 SMR3AQ99954 134 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 FOXC2Q99958 501 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 LIME1Q9H400 295 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 LZTFL1Q9NQ48 299 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 NPDC1Q9NQX5 325 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 DLL4Q9NR61 685 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 STMN3Q9NZ72 180 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 RPH3AQ9Y2J0 694 aaPredicted RBP13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 AAR2Q9Y312 384 aaKnown RBP13.1□□□□□ -0.31
SHKBP1-208ENST00000595726 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 C5orf60A6NFR6 353 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 FFAR3O14843 346 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 GPR42O15529 346 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 IGFBP2P18065 325 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 CARSP49589 748 aaKnown RBP13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 GDF10P55107 478 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 XIAPP98170 497 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 PRPSAP1Q14558 356 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 BRD3Q15059 726 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 ZNF766Q5HY98 468 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 CNSTQ6PJW8 725 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 RANBP10Q6VN20 620 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 NEK10Q6ZWH5 1172 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 FAM71DQ8N9W8 422 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 CHDHQ8NE62 594 aaPredicted RBP13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 THAP3Q8WTV1 239 aaPredicted RBP13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 MIEF2Q96C03 454 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 APOL2Q9BQE5 337 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 HES7Q9BYE0 225 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 GRPEL1Q9HAV7 217 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 KLHL1Q9NR64 748 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 CRLS1Q9UJA2 301 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 PPT2Q9UMR5 302 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 ASF1AQ9Y294 204 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 NBEAL1Q6ZS30 2694 aa13.09□□□□□ -0.31
SHKBP1-208ENST00000595726 STAB1Q9NY15 2570 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 NKX2-6A6NCS4 301 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 RALBP11234 206 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 CDKN1CP49918 316 aaPredicted RBP13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 RAB28P51157 221 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 OCA2Q04671 838 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 CACNG1Q06432 222 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF33BQ06732 778 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 GRM7Q14831 915 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 CEBPEQ15744 281 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 ABHD17BQ5VST6 288 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 NAPRTQ6XQN6 538 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 CLDN19Q8N6F1 224 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 PPP1R2P1Q96PQ5 205 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 DMRTA2Q96SC8 542 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 COPS8Q99627 209 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF559Q9BR84 538 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 UCK2Q9BZX2 261 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 ZNF304Q9HCX3 659 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 OR6C2Q9NZP2 312 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
SHKBP1-208ENST00000595726 IGHV1-45A0A0A0MS14 117 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 AGAP14A8MT82 685 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 A8MUI8 341 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 CCL22O00626 93 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 LIASO43766 372 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 NRDCO43847 1150 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 METTL18O95568 372 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 PRSS56P0CW18 603 aa13.07□□□□□ -0.32
SHKBP1-208ENST00000595726 ABOP16442 354 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms