RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ACPPP15309 386 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 TPSB2P20231 275 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 ARNTP27540 789 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 CRADDP78560 199 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 CDK16Q00536 496 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 TPSAB1Q15661 275 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 FAM214AQ32MH5 1076 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 AARS2Q5JTZ9 985 aaKnown RBP14.09□□□□□ -0.15
PNKP-202ENST00000593706 C1QL3Q5VWW1 255 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 ISLR2Q6UXK2 745 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 SRRM1Q8IYB3 904 aaKnown RBP14.09□□□□□ -0.15
PNKP-202ENST00000593706 PRSS58Q8IYP2 241 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 SLC34A3Q8N130 599 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 KRT222Q8N1A0 295 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 OR11G2Q8NGC1 345 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 PBKQ96KB5 322 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 MAGEB10Q96LZ2 347 aaPredicted RBP14.09□□□□□ -0.15
PNKP-202ENST00000593706 CARD6Q9BX69 1037 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 CHRAC1Q9NRG0 131 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 IL1RAPL1Q9NZN1 696 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 MARCH4Q9P2E8 410 aaPredicted RBP14.09□□□□□ -0.15
PNKP-202ENST00000593706 PKDREJQ9NTG1 2253 aa14.09□□□□□ -0.15
PNKP-202ENST00000593706 SCN3AQ9NY46 2000 aa14.08□□□□□ -0.15
PNKP-202ENST00000593706 ARHGAP10A1A4S6 786 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 ZG16O60844 167 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 GPC4O75487 556 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 FKBP9O95302 570 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 ONECUT2O95948 504 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 ERVK-10P10266 1014 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 PSMB5P28074 263 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 CARSP49589 748 aaKnown RBP14.08□□□□□ -0.16
PNKP-202ENST00000593706 BASP1P80723 227 aaKnown RBP14.08□□□□□ -0.16
PNKP-202ENST00000593706 OCA2Q04671 838 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 GRB7Q14451 532 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 PCID2Q5JVF3 399 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 PTRHD1Q6GMV3 140 aaKnown RBP14.08□□□□□ -0.16
PNKP-202ENST00000593706 GSTA5Q7RTV2 222 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 SLC35F6Q8N357 371 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 DTWD1Q8N5C7 304 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 PPHLN1Q8NEY8 458 aaKnown RBP14.08□□□□□ -0.16
PNKP-202ENST00000593706 MARVELD3Q96A59 401 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 RAD51AP1Q96B01 352 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 MIPEPQ99797 713 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 KIFC1Q9BW19 673 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 IL22Q9GZX6 179 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 ZNF160Q9HCG1 818 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 ZNF304Q9HCX3 659 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 CATSPERZQ9NTU4 200 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 OLAHQ9NV23 265 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 MRFAP1Q9Y605 127 aa14.08□□□□□ -0.16
PNKP-202ENST00000593706 ADGRG4Q8IZF6 3080 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 A0A0J9YVX5 310 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 HYKKA2RU49 373 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 USP27XA6NNY8 438 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 HNRNPRO43390 633 aaKnown RBP14.07□□□□□ -0.16
PNKP-202ENST00000593706 CTSVO60911 334 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 HPP00738 406 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 EIF2S1P05198 315 aaKnown RBP14.07□□□□□ -0.16
PNKP-202ENST00000593706 FBLP22087 321 aaKnown RBP14.07□□□□□ -0.16
PNKP-202ENST00000593706 AOAHP28039 575 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 BDKRB1P46663 353 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 TTPAP49638 278 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 SESN2P58004 480 aaPredicted RBP14.07□□□□□ -0.16
PNKP-202ENST00000593706 ARG2P78540 354 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 KLC1Q07866 573 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 MFAP5Q13361 173 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 ZRSR2Q15696 482 aaKnown RBP14.07□□□□□ -0.16
PNKP-202ENST00000593706 WASHC2DQ5SRD0 308 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 ANKRD22Q5VYY1 191 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 LRRC8BQ6P9F7 803 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 LDB1Q86U70 411 aaPredicted RBP14.07□□□□□ -0.16
PNKP-202ENST00000593706 FJX1Q86VR8 437 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 BCORP1Q8N888 145 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 STT3BQ8TCJ2 826 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 ZUFSPQ96AP4 578 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 MIEF2Q96C03 454 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 PANX3Q96QZ0 392 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 OSBPL9Q96SU4 736 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 SLX1AQ9BQ83 275 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 SYBUQ9NX95 663 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 ZNF282Q9UDV7 671 aaPredicted RBP14.07□□□□□ -0.16
PNKP-202ENST00000593706 GNPTGQ9UJJ9 305 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 C3orf18Q9UK00 162 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 SNX12Q9UMY4 172 aa14.07□□□□□ -0.16
PNKP-202ENST00000593706 POLQO75417 2590 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 ANKRD17O75179 2603 aaKnown RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 A0A1B0GUH1 482 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 DYTNA2CJ06 578 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 FITM1A5D6W6 292 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 TARM1B6A8C7 271 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 PRSS44E7EML9 344 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 PGRMC1O00264 195 aaKnown RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 CES2O00748 559 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 PRMT5O14744 637 aaPredicted RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 ZSCAN12O43309 604 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 SRPX2O60687 465 aaPredicted RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 SLCO2B1O94956 709 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 NMBRP28336 390 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 COILP38432 576 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms