RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SYNPO2LQ9H987 977 aa15.6■□□□□ 0.09
LIG1-205ENST00000593425 ZNF282Q9UDV7 671 aaPredicted RBP15.6■□□□□ 0.09
LIG1-205ENST00000593425 GNPTGQ9UJJ9 305 aa15.6■□□□□ 0.09
LIG1-205ENST00000593425 TSR3Q9UJK0 312 aaKnown RBP15.6■□□□□ 0.09
LIG1-205ENST00000593425 C3orf18Q9UK00 162 aa15.6■□□□□ 0.09
LIG1-205ENST00000593425 POLEQ07864 2286 aa15.6■□□□□ 0.09
LIG1-205ENST00000593425 CELSR2Q9HCU4 2923 aa15.6■□□□□ 0.09
LIG1-205ENST00000593425 CRYBG3Q68DQ2 2970 aa15.6■□□□□ 0.09
LIG1-205ENST00000593425 ARHGAP10A1A4S6 786 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 FFAR3O14843 346 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 GPR42O15529 346 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 APRTP07741 180 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 COX6A1P12074 109 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 PRF1P14222 555 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 RPS3P23396 243 aaKnown RBP eCLIP15.59■□□□□ 0.09
LIG1-205ENST00000593425 OCA2Q04671 838 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 SNX1Q13596 522 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 PCID2Q5JVF3 399 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 CTSL3PQ5NE16 218 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 ATG9BQ674R7 924 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 RPUSD3Q6P087 351 aaKnown RBP15.59■□□□□ 0.09
LIG1-205ENST00000593425 PRMT9Q6P2P2 845 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 OTOAQ7RTW8 1153 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 FJX1Q86VR8 437 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 TMEM139Q8IV31 216 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 OR1N1Q8NGS0 311 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 GSDMBQ8TAX9 411 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 PSMF1Q92530 271 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 LMF1Q96S06 567 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 TREX1Q9NSU2 369 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 OLAHQ9NV23 265 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 PTGFRNQ9P2B2 879 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 ZNF148Q9UQR1 794 aa15.59■□□□□ 0.09
LIG1-205ENST00000593425 IGLV3-12A0A075B6K2 115 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 OR2A25A4D2G3 310 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 CELA2AP08217 269 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 STSP08842 583 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 ZSCAN5DPP0CG00 497 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 FBLP22087 321 aaKnown RBP15.58■□□□□ 0.08
LIG1-205ENST00000593425 NMBRP28336 390 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 SOX11P35716 441 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 TDGF1P3P51864 188 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 EIF3BP55884 814 aaKnown RBP15.58■□□□□ 0.08
LIG1-205ENST00000593425 SESN2P58004 480 aaPredicted RBP15.58■□□□□ 0.08
LIG1-205ENST00000593425 ARG2P78540 354 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 EEF1A2Q05639 463 aaKnown RBP15.58■□□□□ 0.08
LIG1-205ENST00000593425 KIF5AQ12840 1032 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 PRTGQ2VWP7 1150 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 SEL1L2Q5TEA6 688 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 ZNF324BQ6AW86 544 aaPredicted RBP15.58■□□□□ 0.08
LIG1-205ENST00000593425 FBXO42Q6P3S6 717 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 SLC13A5Q86YT5 568 aaPredicted RBP15.58■□□□□ 0.08
LIG1-205ENST00000593425 KBTBD2Q8IY47 623 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 SLC34A3Q8N130 599 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 RAB42Q8N4Z0 105 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 AMER2Q8N7J2 671 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 BCORP1Q8N888 145 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 BRIX1Q8TDN6 353 aaKnown RBP15.58■□□□□ 0.08
LIG1-205ENST00000593425 MARVELD3Q96A59 401 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 MAGEB10Q96LZ2 347 aaPredicted RBP15.58■□□□□ 0.08
LIG1-205ENST00000593425 TAAR6Q96RI8 345 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 ZFYVE21Q9BQ24 234 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 DPH7Q9BTV6 452 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 ACAT2Q9BWD1 397 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 PLA2G3Q9NZ20 509 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 SPATA7Q9P0W8 599 aa15.58■□□□□ 0.08
LIG1-205ENST00000593425 NSG1A0A0A6YYJ2 146 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 H0YGG7 62 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 KPNA5O15131 536 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 NIPSNAP2O75323 286 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 NDUFS3O75489 264 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 JRKO75564 520 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 USP1O94782 785 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 PRR35P0CG20 571 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 ERGP11308 486 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 RPL22P35268 128 aaKnown RBP15.57■□□□□ 0.08
LIG1-205ENST00000593425 CCNFP41002 786 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 KCNK10P57789 538 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 ARF3P61204 181 aaPredicted RBP15.57■□□□□ 0.08
LIG1-205ENST00000593425 MUM1Q2TAK8 710 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.57■□□□□ 0.08
LIG1-205ENST00000593425 LRRC6Q86X45 466 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 SIRT6Q8N6T7 355 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 FAM136AQ96C01 138 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 CABS1Q96KC9 395 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 BAG1Q99933 345 aaPredicted RBP15.57■□□□□ 0.08
LIG1-205ENST00000593425 FRMD8P1Q9BZ68 369 aaPredicted RBP15.57■□□□□ 0.08
LIG1-205ENST00000593425 PAK5Q9P286 719 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 ENTPD4Q9Y227 616 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 MRFAP1Q9Y605 127 aa15.57■□□□□ 0.08
LIG1-205ENST00000593425 DIDO1Q9BTC0 2240 aaKnown RBP15.57■□□□□ 0.08
LIG1-205ENST00000593425 A0A1B0GUH1 482 aa15.56■□□□□ 0.08
LIG1-205ENST00000593425 A0A1W2PQ72 361 aa15.56■□□□□ 0.08
LIG1-205ENST00000593425 IDSB3KWA1 339 aa15.56■□□□□ 0.08
LIG1-205ENST00000593425 HNRNPRO43390 633 aaKnown RBP15.56■□□□□ 0.08
LIG1-205ENST00000593425 F10P00742 488 aa15.56■□□□□ 0.08
LIG1-205ENST00000593425 ERVK-10P10266 1014 aa15.56■□□□□ 0.08
LIG1-205ENST00000593425 ARNTP27540 789 aa15.56■□□□□ 0.08
LIG1-205ENST00000593425 CMPK1P30085 196 aa15.56■□□□□ 0.08
LIG1-205ENST00000593425 TNFSF10P50591 281 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms