RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 USP1O94782 785 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 CD63P08962 238 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 ERGP11308 486 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 PSMB5P28074 263 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 GRIA3P42263 894 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 CLCN7P51798 805 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 ATP1A4Q13733 1029 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 CYP2A13Q16696 494 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 NKAIN1Q4KMZ8 207 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 ACSBG2Q5FVE4 666 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 ZC3H12BQ5HYM0 836 aaKnown RBP12.65□□□□□ -0.38
H3F3B-213ENST00000593254 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.65□□□□□ -0.38
H3F3B-213ENST00000593254 MLIPQ5VWP3 458 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 SLC6A19Q695T7 634 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 MRPL14Q6P1L8 145 aaKnown RBP12.65□□□□□ -0.38
H3F3B-213ENST00000593254 MED25Q71SY5 747 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 RAB43Q86YS6 212 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 HPS6Q86YV9 775 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 LMNTD2Q8IXW0 634 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 RBMXL3Q8N7X1 1067 aaKnown RBP12.65□□□□□ -0.38
H3F3B-213ENST00000593254 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.38
H3F3B-213ENST00000593254 OR2A1Q8NGT9 310 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 DLG3Q92796 817 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 PNPLA2Q96AD5 504 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 ZUFSPQ96AP4 578 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 C19orf60Q96EN9 201 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 C5orf34Q96MH7 638 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 ZNF285Q96NJ3 590 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 SLAMF7Q9NQ25 335 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 TXLNGQ9NUQ3 528 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 LUZP4Q9P127 313 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 GPN3Q9UHW5 284 aaPredicted RBP12.65□□□□□ -0.38
H3F3B-213ENST00000593254 SNX12Q9UMY4 172 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 CROCCQ5TZA2 2017 aa12.65□□□□□ -0.38
H3F3B-213ENST00000593254 GOLGA6L10A0A0M3HER8 536 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 A0A1B0GX78 115 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 ARHGEF33A8MVX0 844 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 E5RI56 91 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 ZNF185O15231 689 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 KIF5CO60282 957 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 CTSVO60911 334 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 PSIP1O75475 530 aaKnown RBP12.64□□□□□ -0.39
H3F3B-213ENST00000593254 ONECUT2O95948 504 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 F7P08709 466 aaPredicted RBP12.64□□□□□ -0.39
H3F3B-213ENST00000593254 ARSFP54793 590 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 RRADP55042 308 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 CTBP1Q13363 440 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 THOC5Q13769 683 aaKnown RBP12.64□□□□□ -0.39
H3F3B-213ENST00000593254 SSPNQ14714 243 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 NR6A1Q15406 480 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 LONRF1Q17RB8 773 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 KLHL38Q2WGJ6 581 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 TCTE1Q5JU00 501 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 RNASEH2BQ5TBB1 312 aaKnown RBP12.64□□□□□ -0.39
H3F3B-213ENST00000593254 MRGPREQ86SM8 312 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 DENND6AQ8IWF6 608 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 PPIL6Q8IXY8 311 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 OR2L3Q8NG85 312 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 GIMAP7Q8NHV1 300 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 KCNJ9Q92806 393 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 IP6K3Q96PC2 410 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 SLC30A3Q99726 388 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 MIPEPQ99797 713 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 SLC22A11Q9NSA0 550 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 IFT80Q9P2H3 777 aaPredicted RBP12.64□□□□□ -0.39
H3F3B-213ENST00000593254 KLHL42Q9P2K6 505 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 NDOR1Q9UHB4 597 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 TSR3Q9UJK0 312 aaKnown RBP12.64□□□□□ -0.39
H3F3B-213ENST00000593254 MED16Q9Y2X0 877 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 PTRH2Q9Y3E5 179 aaKnown RBP12.64□□□□□ -0.39
H3F3B-213ENST00000593254 MAD1L1Q9Y6D9 718 aa12.64□□□□□ -0.39
H3F3B-213ENST00000593254 CTAGE9A4FU28 777 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 MYO1CO00159 1063 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 PRF1P14222 555 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 ITGAXP20702 1163 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 MCM3P25205 808 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
H3F3B-213ENST00000593254 OTX2P32243 289 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 FOLR3P41439 243 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 SLC1A2P43004 574 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 FASTKQ14296 549 aaKnown RBP12.63□□□□□ -0.39
H3F3B-213ENST00000593254 GRM7Q14831 915 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 SLC9A5Q14940 896 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 TTLL9Q3SXZ7 439 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 YOD1Q5VVQ6 348 aaPredicted RBP12.63□□□□□ -0.39
H3F3B-213ENST00000593254 ZNF549Q6P9A3 640 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 TTLL10Q6ZVT0 673 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 NEK10Q6ZWH5 1172 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 FDCSPQ8NFU4 85 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 OR9A1PQ8NGU1 263 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 CALML6Q8TD86 181 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 FKBP10Q96AY3 582 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 SNRNP40Q96DI7 357 aaKnown RBP12.63□□□□□ -0.39
H3F3B-213ENST00000593254 SELENOSQ9BQE4 189 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 NUDT9Q9BW91 350 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 MFRPQ9BY79 579 aa12.63□□□□□ -0.39
H3F3B-213ENST00000593254 FBXO6Q9NRD1 293 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms