RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PMS2CLQ68D20 193 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 SHQ1Q6PI26 577 aaKnown RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 GBP6Q6ZN66 633 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 RGS9BPQ6ZS82 235 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 C15orf52Q6ZUT6 534 aaKnown RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 ZNF771Q7L3S4 317 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 TSPAN33Q86UF1 283 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 PM20D2Q8IYS1 436 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 ADGRF2Q8IZF7 708 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 HDDC3Q8N4P3 179 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 DEFB123Q8N688 67 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 SLC5A8Q8N695 610 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 LMNTD1Q8N9Z9 388 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 GMCL1P1Q8NEA9 526 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 GIMAP5Q96F15 307 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 LINGO1Q96FE5 620 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 ZNF396Q96N95 335 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 ZNF583Q96ND8 569 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 DACH2Q96NX9 599 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 RAB3IPQ96QF0 476 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 TXN2Q99757 166 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 C1QTNF1Q9BXJ1 281 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 MAK16Q9BXY0 300 aaKnown RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 FUT8Q9BYC5 575 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 PRO3102Q9H379 93 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 CLSTN2Q9H4D0 955 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 SLC35C2Q9NQQ7 365 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 NENFQ9UMX5 172 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 FAF1Q9UNN5 650 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 DLGAP4Q9Y2H0 992 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 NOSIPQ9Y314 301 aaKnown RBP4.68□□□□□ -1.66
SMAD4-216ENST00000593223 TMED5Q9Y3A6 229 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 CMAHPQ9Y471 501 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 ANKARQ7Z5J8 1434 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 CCDC88AQ3V6T2 1871 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 IL16Q14005 1332 aa4.68□□□□□ -1.66
SMAD4-216ENST00000593223 NOTCH4Q99466 2003 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 TOGARAM1Q9Y4F4 1720 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 PPIP5K1Q6PFW1 1433 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 RNF103-CHMP3A0A140T963 221 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 RGSL1A5PLK6 1076 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 OR5K3A6NET4 321 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 TMEM178BH3BS89 294 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 RNF103O00237 685 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 BMPR1BO00238 502 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 EIF3DO15371 548 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 KINO60870 393 aaKnown RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 TRIM16O95361 564 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 OR2C1O95371 312 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 IGLV2-11P01706 119 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 SKILP12757 684 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 GABRB1P18505 474 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 ACADLP28330 430 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 TM4SF1P30408 202 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 ADSSP30520 456 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 RDXP35241 583 aaKnown RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 EIF2DP41214 584 aaKnown RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 MTIF2P46199 727 aaKnown RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 CD81P60033 236 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 GMFBP60983 142 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 PITX1P78337 314 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 ARL16Q0P5N6 197 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 ILF3Q12906 894 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 CBX3Q13185 183 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 SGCGQ13326 291 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 LCN10Q6JVE6 187 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 CFAP77Q6ZQR2 320 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 CUZD1Q86UP6 607 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 ARID3BQ8IVW6 561 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 MYOCDQ8IZQ8 938 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 POMGNT2Q8NAT1 580 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 OR52I2Q8NH67 350 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 TRPC4APQ8TEL6 797 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 DNASE2BQ8WZ79 361 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 PHF21AQ96BD5 680 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 SAT2Q96F10 170 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 FAM81BQ96LP2 452 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 NODALQ96S42 347 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 SRSF8Q9BRL6 282 aaKnown RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 LRRC1Q9BTT6 524 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 THUMPD3Q9BV44 507 aaKnown RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 RAD21L1Q9H4I0 556 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 RNF186Q9NXI6 227 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 COX16Q9P0S2 106 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 MARCH4Q9P2E8 410 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-216ENST00000593223 CLIP2Q9UDT6 1046 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 PRDM4Q9UKN5 801 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 GRID1Q9ULK0 1009 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 B3GALT5Q9Y2C3 310 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 JRKLQ9Y4A0 524 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 FAM169AQ9Y6X4 670 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 ABCC6O95255 1503 aa4.67□□□□□ -1.66
SMAD4-216ENST00000593223 ANKRD30AQ9BXX3 1397 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 ITSN1Q15811 1721 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 ARPC4-TTLL3A0A0A6YYG9 625 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 ZCWPW2A0A1B0GU75 182 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 H0YAE9 185 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 K7EPI3 171 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 FGF17O60258 216 aa4.66□□□□□ -1.66
SMAD4-216ENST00000593223 SMPD2O60906 423 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms