RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 RAPSNQ13702 412 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 BOP1Q14137 746 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PTPRCAPQ14761 206 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PPP1R7Q15435 360 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PLEKHN1Q494U1 663 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 SYTL3Q4VX76 610 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ZNF789Q5FWF6 425 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 RPS26P11Q5JNZ5 115 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ANKRD20A2Q5SQ80 823 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ANKRD20A1Q5TYW2 823 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ANKRD20A3Q5VUR7 823 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 LCN10Q6JVE6 187 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 WDR93Q6P2C0 686 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 DARS2Q6PI48 645 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 CCDC137Q6PK04 289 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PPP1R21Q6ZMI0 780 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 CDHR3Q6ZTQ4 885 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 TBC1D21Q8IYX1 336 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ADGRF3Q8IZF5 1079 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 SLC34A3Q8N130 599 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 CISD2Q8N5K1 135 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PHC3Q8NDX5 983 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 OR13C4Q8NGS5 318 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ACTL9Q8TC94 416 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 STK35Q8TDR2 534 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 SREK1Q8WXA9 508 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 SLC22A18Q96BI1 424 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PPM1MQ96MI6 270 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 HGH1Q9BTY7 390 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 TSSK1BQ9BXA7 367 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ARNT2Q9HBZ2 717 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 INTS7Q9NVH2 962 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 P4HTMQ9NXG6 502 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 MTRF1LQ9UGC7 380 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 GDF2Q9UK05 429 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ZNF148Q9UQR1 794 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 ASF1AQ9Y294 204 aa9.09□□□□□ -0.95
BRCA1-226ENST00000591534 UTP20O75691 2785 aaKnown RBP9.09□□□□□ -0.95
BRCA1-226ENST00000591534 PRRC2CQ9Y520 2896 aaKnown RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 SPTAN1Q13813 2472 aaKnown RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 IGLV3-16A0A075B6K0 115 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 A0A0J9YY10 115 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 CCDC78A2IDD5 438 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 CCDC151A5D8V7 595 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 WIPF3A6NGB9 483 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 H7C0S8 307 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 KCNN4O15554 427 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 SGTAO43765 313 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 KLF7O75840 302 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 PF4P02776 101 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 OR56A5P0C7T3 313 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 RBP3P10745 1247 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 ESRRAP11474 423 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 UGT2B7P16662 529 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 PSMB4P28070 264 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 TNFRSF8P28908 595 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 DNAJA1P31689 397 aaKnown RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 PPARGP37231 505 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 GLRBP48167 497 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 ZNF140P52738 457 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 EIF3EP60228 445 aaKnown RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 KLF1Q13351 362 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 ITIH4Q14624 930 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 KIR2DS3Q14952 304 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 KCTD19Q17RG1 926 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 NKAIN1Q4KMZ8 207 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 PRR30Q53SZ7 412 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 TEX35Q5T0J7 233 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 C1orf189Q5VU69 101 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 YOD1Q5VVQ6 348 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 ARMC3Q5W041 872 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 ARHGEF18Q6ZSZ5 1173 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 CROCCP2Q86T23 111 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 SERPINA9Q86WD7 417 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 LILRA3Q8N6C8 439 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 STYXQ8WUJ0 223 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 SPATA13Q96N96 652 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 APOL2Q9BQE5 337 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 KLHL25Q9H0H3 589 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 FAM96AQ9H5X1 160 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 XKR8Q9H6D3 395 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 LRRC40Q9H9A6 602 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 ASF1BQ9NVP2 202 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 NLE1Q9NVX2 485 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 SMARCAL1Q9NZC9 954 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 IL1RAPL1Q9NZN1 696 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 NXT1Q9UKK6 140 aaKnown RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 PLCL2Q9UPR0 1127 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 R3HDM2Q9Y2K5 976 aaKnown RBP9.08□□□□□ -0.96
BRCA1-226ENST00000591534 UNC79Q9P2D8 2635 aa9.08□□□□□ -0.96
BRCA1-226ENST00000591534 SPTBN1Q01082 2364 aaKnown RBP9.07□□□□□ -0.96
BRCA1-226ENST00000591534 UQCRHLA0A096LP55 91 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 TRBV5-4A0A0C4DH59 114 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 ISM1B1AKI9 464 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 SHISA8B8ZZ34 492 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 LINC01387J3KSC0 135 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 M0R082 166 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 AGPSO00116 658 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 AP2A1O95782 977 aa9.07□□□□□ -0.96
BRCA1-226ENST00000591534 LDLRP01130 860 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms