RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 RASGRF2O14827 1237 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 SRPX2O60687 465 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-216ENST00000591275 BMP10O95393 424 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 CRYABP02511 175 aaKnown RBP15.15■□□□□ 0.02
DDX39A-216ENST00000591275 TPM1P09493 284 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 ITGAMP11215 1152 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 CXCR2P25025 360 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 EMP2P54851 167 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 COPS2P61201 443 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 RBPJQ06330 500 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 HIBCHQ6NVY1 386 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-216ENST00000591275 AADACL2Q6P093 401 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 PRMT9Q6P2P2 845 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 XKRXQ6PP77 449 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 ZUFSPQ96AP4 578 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 C10orf90Q96M02 699 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 ENAMQ9NRM1 1142 aa15.15■□□□□ 0.02
DDX39A-216ENST00000591275 NAV3Q8IVL0 2385 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 MAP1AP78559 2803 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-216ENST00000591275 IGLV3-12A0A075B6K2 115 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 IGHV1-45A0A0A0MS14 117 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 TARM1B6A8C7 271 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 PRICKLE3O43900 615 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-216ENST00000591275 SLC19A2O60779 497 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 GPC4O75487 556 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 ESRRAP11474 423 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-216ENST00000591275 FDXRP22570 491 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 MAGEA1P43355 309 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 CASP6P55212 293 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 CDSNQ15517 529 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 C3AR1Q16581 482 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 PARP6Q2NL67 630 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.14■□□□□ 0.017e-7■□□□□ 8.4
DDX39A-216ENST00000591275 C11orf63Q6NUN7 778 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 UNC5DQ6UXZ4 953 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 KRT222Q8N1A0 295 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 FAM71DQ8N9W8 422 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 DNAJB8Q8NHS0 232 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 SUN3Q8TAQ9 357 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 ASZ1Q8WWH4 475 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 HDAC10Q969S8 669 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 RIC8BQ9NVN3 520 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 TRPC4Q9UBN4 977 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 SLC2A6Q9UGQ3 507 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 TINAGQ9UJW2 476 aa15.14■□□□□ 0.01
DDX39A-216ENST00000591275 PRAMEF2O60811 474 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 GOT2P00505 430 aaKnown RBP15.13■□□□□ 0.01
DDX39A-216ENST00000591275 APOA4P06727 396 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 ERVK-10P10266 1014 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 PSMA3P25788 255 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 SSTR2P30874 369 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 BDKRB1P46663 353 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 YBX1P67809 324 aaKnown RBP15.13■□□□□ 0.01
DDX39A-216ENST00000591275 SEMA3AQ14563 771 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 TESK1Q15569 626 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 MUM1Q2TAK8 710 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 CCSMST1Q4G0I0 132 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 OR2L3Q8NG85 312 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 OR13J1Q8NGT2 312 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 PDLIM2Q96JY6 352 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 CABS1Q96KC9 395 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 RUVBL2Q9Y230 463 aaKnown RBP15.13■□□□□ 0.01
DDX39A-216ENST00000591275 EFR3BQ9Y2G0 817 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 NFS1Q9Y697 457 aa15.13■□□□□ 0.01
DDX39A-216ENST00000591275 NIPBLQ6KC79 2804 aaeCLIP15.12■□□□□ 0.01
DDX39A-216ENST00000591275 OR5H15A6NDH6 313 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 F8W8V4 182 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 FKBP9O95302 570 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 HEXBP07686 556 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 CTNNA1P35221 906 aaKnown RBP15.12■□□□□ 0.01
DDX39A-216ENST00000591275 KIR3DL1P43629 444 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 SMSP52788 366 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 ZNF33BQ06732 778 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 ABHD17BQ5VST6 288 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 TTC23LQ6PF05 361 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 AFTPHQ6ULP2 937 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 RIPOR1Q6ZS17 1223 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 NCCRP1Q6ZVX7 275 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-216ENST00000591275 NEK10Q6ZWH5 1172 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 RNF44Q7L0R7 432 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 LDB1Q86U70 411 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-216ENST00000591275 VSTM4Q8IW00 320 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 OR52K1Q8NGK4 314 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 SKA2Q8WVK7 121 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-216ENST00000591275 MTFMTQ96DP5 389 aaKnown RBP15.12■□□□□ 0.01
DDX39A-216ENST00000591275 TTC1Q99614 292 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 TSSK1BQ9BXA7 367 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 RAB11FIP5Q9BXF6 653 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 RNF32Q9H0A6 362 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 STMN3Q9NZ72 180 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 TTC7AQ9ULT0 858 aaPredicted RBP15.12■□□□□ 0.01
DDX39A-216ENST00000591275 PCDHA3Q9Y5H8 950 aa15.12■□□□□ 0.01
DDX39A-216ENST00000591275 A0A1W2PQ72 361 aa15.11■□□□□ 0.01
DDX39A-216ENST00000591275 FAM227AF5H4B4 570 aa15.11■□□□□ 0.01
DDX39A-216ENST00000591275 H0YGG7 62 aa15.11■□□□□ 0.01
DDX39A-216ENST00000591275 CBFA2T2O43439 604 aa15.11■□□□□ 0.01
DDX39A-216ENST00000591275 SLCO2B1O94956 709 aa15.11■□□□□ 0.01
DDX39A-216ENST00000591275 AOAHP28039 575 aa15.11■□□□□ 0.01
DDX39A-216ENST00000591275 PTPN7P35236 360 aa15.11■□□□□ 0.01
DDX39A-216ENST00000591275 ST13P50502 369 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms