RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 NCF1P14598 390 aaPredicted RBP16.04■□□□□ 0.16
GCDH-213ENST00000590627 IMPDH1P20839 514 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 IMPA1P29218 277 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 ATP1A2P50993 1020 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 PDX1P52945 283 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 HERVK_113P63132 956 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 ASPHQ12797 758 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 PCBP2Q15366 365 aaKnown RBP eCLIP16.04■□□□□ 0.16
GCDH-213ENST00000590627 ZXDCQ2QGD7 858 aaPredicted RBP16.04■□□□□ 0.16
GCDH-213ENST00000590627 MBOAT1Q6ZNC8 495 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 NUDCD3Q8IVD9 361 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 RAB42Q8N4Z0 105 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 OR52E1Q8NGJ3 308 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 HMGCLL1Q8TB92 370 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 ZNF480Q8WV37 535 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 SH3KBP1Q96B97 665 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 LIN37Q96GY3 246 aaPredicted RBP16.04■□□□□ 0.16
GCDH-213ENST00000590627 EGFL8Q99944 293 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 PAIP2Q9BPZ3 127 aaKnown RBP16.04■□□□□ 0.16
GCDH-213ENST00000590627 MECRQ9BV79 373 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 ERVK-6Q9BXR3 956 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 TWSG1Q9GZX9 223 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 LNPEPQ9UIQ6 1025 aa16.04■□□□□ 0.16
GCDH-213ENST00000590627 TDRKHQ9Y2W6 561 aaKnown RBP16.04■□□□□ 0.16
GCDH-213ENST00000590627 KRT87PA6NCN2 255 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 ZNF839A8K0R7 811 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 K7ENP7 123 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 TNFSF15O95150 251 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 PKLRP30613 574 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 SLC6A12P48065 614 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 RAB28P51157 221 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 MAZP56270 477 aaKnown RBP16.03■□□□□ 0.16
GCDH-213ENST00000590627 NAA20P61599 178 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 HHEXQ03014 270 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 EIF3IQ13347 325 aaKnown RBP16.03■□□□□ 0.16
GCDH-213ENST00000590627 GPR18Q14330 331 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 ANKS6Q68DC2 871 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 INO80CQ6PI98 192 aaPredicted RBP16.03■□□□□ 0.16
GCDH-213ENST00000590627 AGTRAPQ6RW13 159 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 TMEM26Q6ZUK4 368 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 LRRC56Q8IYG6 542 aaPredicted RBP16.03■□□□□ 0.16
GCDH-213ENST00000590627 KYQ8NBH2 561 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 OR6C4Q8NGE1 309 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 OR56A3Q8NH54 315 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 SREK1Q8WXA9 508 aaKnown RBP16.03■□□□□ 0.16
GCDH-213ENST00000590627 TTC9Q92623 222 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 PHF21BQ96EK2 531 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 TMEM79Q9BSE2 394 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 CD244Q9BZW8 370 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 STN1Q9H668 368 aaKnown RBP16.03■□□□□ 0.16
GCDH-213ENST00000590627 ICKQ9UPZ9 632 aa16.03■□□□□ 0.16
GCDH-213ENST00000590627 E7ENX8 843 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 TMX2-CTNND1H3BSU7 103 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 PPM1DO15297 605 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 H2AFYO75367 372 aaKnown RBP16.02■□□□□ 0.16
GCDH-213ENST00000590627 ZIC2O95409 532 aaPredicted RBP16.02■□□□□ 0.16
GCDH-213ENST00000590627 RPS17P08708 135 aaKnown RBP16.02■□□□□ 0.16
GCDH-213ENST00000590627 FGF3P11487 239 aaPredicted RBP16.02■□□□□ 0.16
GCDH-213ENST00000590627 SHMT2P34897 504 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 AGTR2P50052 363 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 PNLIPRP1P54315 467 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 TAP2Q03519 686 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 PDK4Q16654 411 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 ZNF678Q5SXM1 525 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 ZNF438Q7Z4V0 828 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 TRIM42Q8IWZ5 723 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 OR2L8Q8NGY9 312 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 RAB3IL1Q8TBN0 382 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 LCN9Q8WX39 176 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 TMEM237Q96Q45 408 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.02■□□□□ 0.16
GCDH-213ENST00000590627 WWOXQ9NZC7 414 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 OR6C2Q9NZP2 312 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 PLAGL1Q9UM63 463 aa16.02■□□□□ 0.16
GCDH-213ENST00000590627 WDR91A4D1P6 747 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 LILRA5A6NI73 299 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 KLF11O14901 512 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 NUDT21O43809 227 aaKnown RBP16.01■□□□□ 0.15
GCDH-213ENST00000590627 STK16O75716 305 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 SIX3O95343 332 aaPredicted RBP16.01■□□□□ 0.15
GCDH-213ENST00000590627 CCND1P24385 295 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 GRK2P25098 689 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 EEF1DP29692 281 aaKnown RBP16.01■□□□□ 0.15
GCDH-213ENST00000590627 MDH1P40925 334 aaKnown RBP16.01■□□□□ 0.15
GCDH-213ENST00000590627 NR1D2Q14995 579 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 C18orf21Q32NC0 220 aaPredicted RBP16.01■□□□□ 0.15
GCDH-213ENST00000590627 PTCHD3Q3KNS1 767 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 UNC50Q53HI1 259 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 FOXR1Q6PIV2 292 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 LRRC70Q7Z2Q7 622 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 AMIGO1Q86WK6 493 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 SYTL1Q8IYJ3 562 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 LINC01555Q8NAE3 123 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 CKAP2Q8WWK9 683 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 SMPDL3AQ92484 453 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 IL17FQ96PD4 163 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 GFM1Q96RP9 751 aaKnown RBP16.01■□□□□ 0.15
GCDH-213ENST00000590627 GATA5Q9BWX5 397 aaPredicted RBP16.01■□□□□ 0.15
GCDH-213ENST00000590627 SGPP1Q9BX95 441 aa16.01■□□□□ 0.15
GCDH-213ENST00000590627 SYNDIG1Q9H7V2 258 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms