RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 CCNFP41002 786 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 ADARP55265 1226 aaKnown RBP17.2■□□□□ 0.34
H3F3B-209ENST00000589949 SNRPNP63162 240 aaKnown RBP17.2■□□□□ 0.34
H3F3B-209ENST00000589949 GPS1Q13098 491 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 AIMP2Q13155 320 aaKnown RBP17.2■□□□□ 0.34
H3F3B-209ENST00000589949 HIF1AQ16665 826 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 KLHL38Q2WGJ6 581 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 YOD1Q5VVQ6 348 aaPredicted RBP17.2■□□□□ 0.34
H3F3B-209ENST00000589949 PRAMEF13Q5VWM6 474 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 ZNF549Q6P9A3 640 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 Q6ZS92 163 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 SDCCAG8Q86SQ7 713 aaPredicted RBP17.2■□□□□ 0.34
H3F3B-209ENST00000589949 CILP2Q8IUL8 1156 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 LRRC8AQ8IWT6 810 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 AMER2Q8N7J2 671 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 SSC4DQ8WTU2 575 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 MAIP1Q8WWC4 291 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 MS4A14Q96JA4 679 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 TCF12Q99081 682 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 BARD1Q99728 777 aaKnown RBP17.2■□□□□ 0.34
H3F3B-209ENST00000589949 DPH7Q9BTV6 452 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 PLEKHB1Q9UF11 243 aaPredicted RBP17.2■□□□□ 0.34
H3F3B-209ENST00000589949 NEU2Q9Y3R4 380 aa17.2■□□□□ 0.34
H3F3B-209ENST00000589949 MYO1CO00159 1063 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 AP3B1O00203 1094 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PSIP1O75475 530 aaKnown RBP17.19■□□□□ 0.34
H3F3B-209ENST00000589949 ALPPP05187 535 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 EIF2S1P05198 315 aaKnown RBP17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PKMP14618 531 aaKnown RBP17.19■□□□□ 0.34
H3F3B-209ENST00000589949 CHRM3P20309 590 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 OGNP20774 298 aaKnown RBP17.19■□□□□ 0.34
H3F3B-209ENST00000589949 ITGA3P26006 1051 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 CLCN7P51798 805 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PRTGQ2VWP7 1150 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 ANKRD20A4Q4UJ75 823 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 LAPTM4BQ86VI4 370 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 DENND6AQ8IWF6 608 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PARP9Q8IXQ6 854 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PRSS58Q8IYP2 241 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 IQCKQ8N0W5 287 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 TTC29Q8NA56 475 aaPredicted RBP17.19■□□□□ 0.34
H3F3B-209ENST00000589949 TRIM58Q8NG06 486 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 OR11G2Q8NGC1 345 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 OR9A1PQ8NGU1 263 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PRR7Q8TB68 274 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 NACC2Q96BF6 587 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PDLIM2Q96JY6 352 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 FOPNLQ96NB1 174 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PKP4Q99569 1192 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 SPATA7Q9P0W8 599 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 PCDHGA10Q9Y5H3 936 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 TEX15Q9BXT5 2789 aa17.19■□□□□ 0.34
H3F3B-209ENST00000589949 MDC1Q14676 2089 aaKnown RBP17.18■□□□□ 0.34
H3F3B-209ENST00000589949 ZCWPW2A0A1B0GU75 182 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 GOLGA6L6A8MZA4 724 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 H0YGG7 62 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 GOLGA8MH3BSY2 632 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 FFAR3O14843 346 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 GPR42O15529 346 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 KRT14P02533 472 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 PIM1P11309 404 aaPredicted RBP17.18■□□□□ 0.34
H3F3B-209ENST00000589949 ARF3P61204 181 aaPredicted RBP17.18■□□□□ 0.34
H3F3B-209ENST00000589949 KLC1Q07866 573 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 FAM214AQ32MH5 1076 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 RNF187Q5TA31 235 aaPredicted RBP17.18■□□□□ 0.34
H3F3B-209ENST00000589949 REXO1L1PQ8IX06 675 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 SHISA5Q8N114 240 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 ARHGEF39Q8N4T4 335 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 PPFIBP2Q8ND30 876 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 STT3BQ8TCJ2 826 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 ZFYVE21Q9BQ24 234 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 PLCD4Q9BRC7 762 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 ILKAPQ9H0C8 392 aaPredicted RBP17.18■□□□□ 0.34
H3F3B-209ENST00000589949 ERRFI1Q9UJM3 462 aaPredicted RBP17.18■□□□□ 0.34
H3F3B-209ENST00000589949 PPP2R2CQ9Y2T4 447 aa17.18■□□□□ 0.34
H3F3B-209ENST00000589949 H3BMM5 538 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 CTBP1Q13363 440 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 CUL1Q13616 776 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 HKDC1Q2TB90 917 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 C4orf17Q53FE4 359 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 VWA2Q5GFL6 755 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 ZNF470Q6ECI4 717 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 ZNF425Q6IV72 752 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 CASC4Q6P4E1 433 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 IGFL2Q6UWQ7 119 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 PAQR7Q86WK9 346 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 RASGEF1CQ8N431 466 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 ZADH2Q8N4Q0 377 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 MAGEC3Q8TD91 643 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 SMPDL3AQ92484 453 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 ZNF669Q96BR6 464 aaPredicted RBP17.17■□□□□ 0.34
H3F3B-209ENST00000589949 C8orf44Q96CB5 159 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 ZNF304Q9HCX3 659 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 FBXO6Q9NRD1 293 aaPredicted RBP17.17■□□□□ 0.34
H3F3B-209ENST00000589949 FAM169AQ9Y6X4 670 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 NBPF19A0A087WUL8 3843 aa17.17■□□□□ 0.34
H3F3B-209ENST00000589949 UNC79Q9P2D8 2635 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 FAM237BA0A1B0GVD1 139 aa17.16■□□□□ 0.34
H3F3B-209ENST00000589949 A1L4Q6 167 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms