RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, human

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX1-206	ENST00000589760	PVR	P15151	417 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	MAP4	P27816	1152 aa	Known RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	CDKN2D	P55273	166 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	ILF2	Q12905	390 aa	Known RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	MAP7	Q14244	749 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	PAQR3	Q6TCH7	311 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	CEP128	Q6ZU80	1094 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	CYS1	Q717R9	158 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	TAX1BP1	Q86VP1	789 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	CACNA2D3	Q8IZS8	1091 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	NLGN4X	Q8N0W4	816 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	IL22RA1	Q8N6P7	574 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	GOLGA6L1	Q8N7Z2	621 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	OR8K5	Q8NH50	307 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	HMGCLL1	Q8TB92	370 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	NKD1	Q969G9	470 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	ZNF501	Q96CX3	271 aa	Predicted RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	FCRL4	Q96PJ5	515 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	CCNL2	Q96S94	520 aa	Predicted RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	ULBP3	Q9BZM4	244 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	FAM129A	Q9BZQ8	928 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	KLHL25	Q9H0H3	589 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	MTRF1L	Q9UGC7	380 aa	Known RBP	13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	PSAT1	Q9Y617	370 aa		13.96	□□□□□ -0.17
RFX1-206	ENST00000589760	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.96	□□□□□ -0.18
RFX1-206	ENST00000589760	FAM95C	A0A1B0GW59	222 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	TCRBV9S1A1T	A0A576	114 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	ADARB2-AS1	A8MUL3	147 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	GFY	I3L273	518 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	MYO1C	O00159	1063 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	KIAA0754	O94854	1291 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	FKBP9	O95302	570 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	MSL3P1	P0C860	447 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	ZNF28	P17035	718 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	FDXR	P22570	491 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	OAS2	P29728	719 aa	Known RBP	13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	CXADR	P78310	365 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	SF1	Q15637	639 aa	Known RBP	13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	GPR19	Q15760	415 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	CYP2A13	Q16696	494 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	CCDC81	Q6ZN84	652 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	TRIM73	Q86UV7	250 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	ZC3HC1	Q86WB0	502 aa	Known RBP	13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	MYO1H	Q8N1T3	1032 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	C19orf47	Q8N9M1	422 aa	Known RBP	13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	LMNTD1	Q8N9Z9	388 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	DENND1A	Q8TEH3	1009 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	EEF1AKMT1	Q8WVE0	214 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	ASB11	Q8WXH4	323 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	TCTN2	Q96GX1	697 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	RHOJ	Q9H4E5	214 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	LRRC4C	Q9HCJ2	640 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	SMYD2	Q9NRG4	433 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	ZDHHC18	Q9NUE0	388 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	INTS7	Q9NVH2	962 aa	Known RBP	13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	TXNDC16	Q9P2K2	825 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	LAMA5	O15230	3695 aa		13.95	□□□□□ -0.18
RFX1-206	ENST00000589760	KRT87P	A6NCN2	255 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	ZNF839	A8K0R7	811 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	PRICKLE3	O43900	615 aa	Predicted RBP	13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	SYF2	O95926	243 aa	Known RBP	13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	MT-ND3	P03897	115 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	C8G	P07360	202 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	ERG	P11308	486 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	CYP2A7	P20853	494 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	VAMP1	P23763	118 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	HSD17B2	P37059	387 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	ADH7	P40394	386 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	GPX6	P59796	221 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	IL2	P60568	153 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	ARHGAP19	Q14CB8	494 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	PWWP2B	Q6NUJ5	590 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	CDHR3	Q6ZTQ4	885 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	UBE2R2	Q712K3	238 aa	Predicted RBP	13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	TIPARP	Q7Z3E1	657 aa	Known RBP	13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	ESX1	Q8N693	406 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	N4BP2L2	Q92802	583 aa	Predicted RBP	13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	LINGO1	Q96FE5	620 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	CRELD1	Q96HD1	420 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	PKP4	Q99569	1192 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	OLFM1	Q99784	485 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	CPNE1	Q99829	537 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	CHRNA10	Q9GZZ6	450 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	TSPYL1	Q9H0U9	437 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	PRORY	Q9H606	182 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	CPNE5	Q9HCH3	593 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	SERTAD3	Q9UJW9	196 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	EPG5	Q9HCE0	2579 aa		13.94	□□□□□ -0.18
RFX1-206	ENST00000589760	FAM159B	A6NKW6	160 aa		13.93	□□□□□ -0.18
RFX1-206	ENST00000589760	CXorf49	A8MYA2	514 aa	Predicted RBP	13.93	□□□□□ -0.18
RFX1-206	ENST00000589760	TMEM150C	B9EJG8	249 aa		13.93	□□□□□ -0.18
RFX1-206	ENST00000589760		K7ENP7	123 aa		13.93	□□□□□ -0.18
RFX1-206	ENST00000589760	SLC16A5	O15375	505 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms