RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 GRTP1Q5TC63 336 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 YOD1Q5VVQ6 348 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-206ENST00000588423 ICE2Q659A1 982 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 ZNF385CQ66K41 422 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-206ENST00000588423 TMEM207Q6UWW9 146 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 RNF44Q7L0R7 432 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 PPFIBP2Q8ND30 876 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 PROKR1Q8TCW9 393 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 MR1Q95460 341 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 GPR22Q99680 433 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 PLCD4Q9BRC7 762 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 TRIM54Q9BYV2 358 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 SPRTNQ9H040 489 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-206ENST00000588423 PCBD2Q9H0N5 130 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 AKIRIN1Q9H9L7 192 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-206ENST00000588423 SLC6A20Q9NP91 592 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 UTP6Q9NYH9 597 aaKnown RBP15.41■□□□□ 0.06
RETREG3-206ENST00000588423 TAC3Q9UHF0 121 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 RALYQ9UKM9 306 aaKnown RBP15.41■□□□□ 0.06
RETREG3-206ENST00000588423 PTPRQQ9UMZ3 2332 aa15.41■□□□□ 0.06
RETREG3-206ENST00000588423 NBEAQ8NFP9 2946 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 FITM1A5D6W6 292 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 PABPN1LA6NDY0 278 aaKnown RBP15.4■□□□□ 0.06
RETREG3-206ENST00000588423 CTSVO60911 334 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 PIAS1O75925 651 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 AGXTP21549 392 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 CCND1P24385 295 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 HRH2P25021 359 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 PTPN4P29074 926 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 PGGT1BP53609 377 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 ARSFP54793 590 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 SLC12A2P55011 1212 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 RPS15P62841 145 aaKnown RBP15.4■□□□□ 0.06
RETREG3-206ENST00000588423 CDC20Q12834 499 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 PHKG1Q16816 387 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 KBTBD12Q3ZCT8 623 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 SOWAHCQ53LP3 525 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-206ENST00000588423 ZNF425Q6IV72 752 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 FAM199XQ6PEV8 388 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-206ENST00000588423 PCSK4Q6UW60 755 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 FBF1Q8TES7 1133 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 TSPAN17Q96FV3 270 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 C17orf62Q9BQA9 187 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 DPH7Q9BTV6 452 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 ACAT2Q9BWD1 397 aa15.4■□□□□ 0.06
RETREG3-206ENST00000588423 CCDC177Q9NQR7 707 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-206ENST00000588423 FARSAQ9Y285 508 aaKnown RBP15.4■□□□□ 0.06
RETREG3-206ENST00000588423 MRPS18BQ9Y676 258 aaKnown RBP15.4■□□□□ 0.06
RETREG3-206ENST00000588423 IGKV1-8A0A0C4DH67 115 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 NKX2-8O15522 239 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 KATNA1O75449 491 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 CREG1O75629 220 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 WISP3O95389 354 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-206ENST00000588423 CTSBP07858 339 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 SAT1P21673 171 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 PHBP35232 272 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 SPRP35270 261 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-206ENST00000588423 TBPL1P62380 186 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 CYP4F2P78329 520 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 TSTA3Q13630 321 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-206ENST00000588423 GRM7Q14831 915 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 AGTRAPQ6RW13 159 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 SBSNQ6UWP8 590 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 SYVN1Q86TM6 617 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 PAQR7Q86WK9 346 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 CEP97Q8IW35 865 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 CTAGE3PQ8IX95 158 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 ZNF655Q8N720 491 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-206ENST00000588423 ATL1Q8WXF7 558 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 BBC3Q96PG8 261 aaPredicted RBP15.39■□□□□ 0.05
RETREG3-206ENST00000588423 GBP5Q96PP8 586 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 FMO2Q99518 471 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 ZFYVE21Q9BQ24 234 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 SELENOSQ9BQE4 189 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 NDC1Q9BTX1 674 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 NLNQ9BYT8 704 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 CHST8Q9H2A9 424 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 ACTL8Q9H568 366 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 GPAMQ9HCL2 828 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 TXLNGQ9NUQ3 528 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 IRAK4Q9NWZ3 460 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 SNX7Q9UNH6 387 aa15.39■□□□□ 0.05
RETREG3-206ENST00000588423 MTO1Q9Y2Z2 717 aaKnown RBP15.39■□□□□ 0.05
RETREG3-206ENST00000588423 ZNF500O60304 480 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-206ENST00000588423 CAPN1P07384 714 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 CD63P08962 238 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 EZRP15311 586 aaKnown RBP15.38■□□□□ 0.05
RETREG3-206ENST00000588423 ECHS1P30084 290 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 YBX1P67809 324 aaKnown RBP15.38■□□□□ 0.05
RETREG3-206ENST00000588423 CDKL1Q00532 357 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 ZNF460Q14592 562 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 USP10Q14694 798 aaKnown RBP15.38■□□□□ 0.05
RETREG3-206ENST00000588423 ZKSCAN8Q15776 578 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-206ENST00000588423 TBR1Q16650 682 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 PPP1R3AQ16821 1122 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 LINC00303Q3SY05 128 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 TAF1BQ53T94 588 aaPredicted RBP15.38■□□□□ 0.05
RETREG3-206ENST00000588423 THEMIS2Q5TEJ8 643 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 PRAMEF13Q5VWM6 474 aa15.38■□□□□ 0.05
RETREG3-206ENST00000588423 LCN10Q6JVE6 187 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms