RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 CFAP46Q8IYW2 2715 aa18.74■□□□□ 0.59
TPM4-208ENST00000588410 PIKFYVEQ9Y2I7 2098 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 GFYI3L273 518 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 DSCR3O14972 297 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 KLF7O75840 302 aaPredicted RBP18.73■□□□□ 0.59
TPM4-208ENST00000588410 WISP1O95388 367 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 SLC16A8O95907 504 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 EIF2S1P05198 315 aaKnown RBP18.73■□□□□ 0.59
TPM4-208ENST00000588410 NR1D1P20393 614 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 PGDP52209 483 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 SSPNQ14714 243 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 THEMIS2Q5TEJ8 643 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 CYHR1Q6ZMK1 362 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 MED25Q71SY5 747 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 CNTN4Q8IWV2 1026 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 TMEM102Q8N9M5 508 aaPredicted RBP18.73■□□□□ 0.59
TPM4-208ENST00000588410 ZNF480Q8WV37 535 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 IP6K3Q96PC2 410 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 ZFYVE21Q9BQ24 234 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 ANKMY1Q9P2S6 941 aa18.73■□□□□ 0.59
TPM4-208ENST00000588410 COL6A6A6NMZ7 2263 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 PEX12O00623 359 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 SEC31AO94979 1220 aaKnown RBP18.72■□□□□ 0.59
TPM4-208ENST00000588410 AHSGP02765 367 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 CASRP41180 1078 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 GCGRP47871 477 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 KCNC4Q03721 635 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 TLE1Q04724 770 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 ATP1A4Q13733 1029 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 ICE2Q659A1 982 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 FRMPD2BQ6IN97 320 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 RNF44Q7L0R7 432 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 SPNS2Q8IVW8 549 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 MYO1HQ8N1T3 1032 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 GPATCH11Q8N954 259 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 PPFIBP2Q8ND30 876 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 OR2Y1Q8NGV0 311 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 MCOLN3Q8TDD5 553 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 PTERQ96BW5 349 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 ZNF285Q96NJ3 590 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 PLCD4Q9BRC7 762 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 SLC6A20Q9NP91 592 aa18.72■□□□□ 0.59
TPM4-208ENST00000588410 LOC105369274A0A096LPK9 316 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 LOC102723532A0A0G2JNH3 316 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 HYKKA2RU49 373 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 OR2A25A4D2G3 310 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 FITM1A5D6W6 292 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 PABPN1LA6NDY0 278 aaKnown RBP18.71■□□□□ 0.59
TPM4-208ENST00000588410 E7ENX8 843 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 K7EM74 188 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 IGHEP01854 428 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 C8GP07360 202 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 GABRB3P28472 473 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 CASQ1P31415 396 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 ABATP80404 500 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 TAP2Q03519 686 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 PRDX1Q06830 199 aaKnown RBP18.71■□□□□ 0.59
TPM4-208ENST00000588410 PDAP1Q13442 181 aaKnown RBP18.71■□□□□ 0.59
TPM4-208ENST00000588410 TEDDM1Q5T9Z0 273 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 MRPL14Q6P1L8 145 aaKnown RBP18.71■□□□□ 0.59
TPM4-208ENST00000588410 ADCK2Q7Z695 626 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 GALNT7Q86SF2 657 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 MRGPREQ86SM8 312 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 ANKMY2Q8IV38 441 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 OR4N4Q8N0Y3 316 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 BBOF1Q8ND07 529 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 EEF1AKMT1Q8WVE0 214 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 FKBP10Q96AY3 582 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 ENAMQ9NRM1 1142 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 SNX24Q9Y343 169 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 PCDHGA9Q9Y5G4 932 aaKnown RBP18.71■□□□□ 0.59
TPM4-208ENST00000588410 TEX264Q9Y6I9 313 aa18.71■□□□□ 0.59
TPM4-208ENST00000588410 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.71■□□□□ 0.59
TPM4-208ENST00000588410 A6NL46 340 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 NRP2O60462 931 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 CSRP3P50461 194 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 CDKN2DP55273 166 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 YBX1P67809 324 aaKnown RBP18.7■□□□□ 0.58
TPM4-208ENST00000588410 PDIA2Q13087 525 aaKnown RBP18.7■□□□□ 0.58
TPM4-208ENST00000588410 RBM20Q5T481 1227 aaKnown RBP18.7■□□□□ 0.58
TPM4-208ENST00000588410 FBXO42Q6P3S6 717 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 PAQR3Q6TCH7 311 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 OVCH1Q7RTY7 1134 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 METTL27Q8N6F8 245 aaPredicted RBP18.7■□□□□ 0.58
TPM4-208ENST00000588410 LINGO1Q96FE5 620 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 FER1L6-AS2Q96M78 137 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 CCDC138Q96M89 665 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 EPN3Q9H201 632 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 SLC22A11Q9NSA0 550 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 SLC17A6Q9P2U8 582 aa18.7■□□□□ 0.58
TPM4-208ENST00000588410 CORO1CQ9ULV4 474 aaPredicted RBP18.7■□□□□ 0.58
TPM4-208ENST00000588410 SLC16A5O15375 505 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 CNOT3O75175 753 aaKnown RBP18.69■□□□□ 0.58
TPM4-208ENST00000588410 ZIC2O95409 532 aaPredicted RBP18.69■□□□□ 0.58
TPM4-208ENST00000588410 ALBP02768 609 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 HIST1H2AGP0C0S8 130 aaPredicted RBP18.69■□□□□ 0.58
TPM4-208ENST00000588410 HIST1H2ADP20671 130 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 RPL21P46778 160 aaKnown RBP18.69■□□□□ 0.58
TPM4-208ENST00000588410 IL2P60568 153 aa18.69■□□□□ 0.58
TPM4-208ENST00000588410 CALCOCO2Q13137 446 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms