RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 HSPA4LO95757 839 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 SLC4A1P02730 911 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 ACP5P13686 325 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 PKMP14618 531 aaKnown RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 ZNF37AP17032 561 aaPredicted RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 GNLYP22749 145 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 RPS3P23396 243 aaKnown RBP eCLIP7.61□□□□□ -1.19
VMP1-204ENST00000587259 TSPAN7P41732 249 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 GPR3P46089 330 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 SLC1A6P48664 564 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 SEPHS1P49903 392 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 GFERP55789 205 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 CORO7P57737 925 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 DCDC1P59894 354 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 ABCE1P61221 599 aaKnown RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 SH3BP2P78314 561 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 MC2RQ01718 297 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 GALNT1Q10472 559 aaPredicted RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 PRKAA1Q13131 559 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 TRA2AQ13595 282 aaKnown RBP eCLIP7.61□□□□□ -1.19
VMP1-204ENST00000587259 ERV3-1Q14264 604 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 ZRANB3Q5FWF4 1079 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 TECRLQ5HYJ1 363 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 CFAP157Q5JU67 520 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 LRRC66Q68CR7 880 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 CNSTQ6PJW8 725 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 CHST15Q7LFX5 561 aaPredicted RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 LYSMD3Q7Z3D4 306 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 TECPR1Q7Z6L1 1165 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 CENPLQ8N0S6 344 aaPredicted RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 FAM26EQ8N5C1 309 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 HEXDCQ8WVB3 486 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 KCTD4Q8WVF5 259 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 C10orf82Q8WW14 230 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 APOBEC4Q8WW27 367 aaKnown RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 LPGAT1Q92604 370 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 FAR2Q96K12 515 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 UBXN10Q96LJ8 280 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 PANX3Q96QZ0 392 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 SLC38A3Q99624 504 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 RIOK2Q9BVS4 552 aaKnown RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 DERL2Q9GZP9 239 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 CAB39LQ9H9S4 337 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 XPR1Q9UBH6 696 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 VTI1BQ9UEU0 232 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 ZNHIT2Q9UHR6 403 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 TRMT6Q9UJA5 497 aaKnown RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 ANAPC2Q9UJX6 822 aa7.61□□□□□ -1.19
VMP1-204ENST00000587259 RUVBL2Q9Y230 463 aaKnown RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.61□□□□□ -1.19
VMP1-204ENST00000587259 A0A0G2JND7 137 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CFAP73A6NFT4 308 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CFAP99D6REC4 459 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 PSMD11O00231 422 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 EIF3FO00303 357 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 PRMT5O14744 637 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 KIF1CO43896 1103 aaKnown RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 DNAJC6O75061 913 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 KATNA1O75449 491 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 IPO13O94829 963 aaKnown RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 DLGAP3O95886 979 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 PIRTP0C851 137 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CCDC166P0CW27 439 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 TPBGLP0DKB5 382 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 ALOX15P16050 662 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 TYRP1P17643 537 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 TCN2P20062 427 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 COL8A1P27658 744 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 DLSTP36957 453 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 STAT5AP42229 794 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 NSG1P42857 185 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 RGS4P49798 205 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 IRF9Q00978 393 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 HHEXQ03014 270 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 PTSQ03393 145 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 FOXM1Q08050 763 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 RCN2Q14257 317 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CSHL1Q14406 222 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 PLA2G4EQ3MJ16 856 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 TTLL9Q3SXZ7 439 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 RBM20Q5T481 1227 aaKnown RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 FAM91A1Q658Y4 838 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CGB2Q6NT52 195 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 ARHGAP22Q7Z5H3 698 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 C10orf107Q8IVU9 208 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 CEP97Q8IW35 865 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 PLD6Q8N2A8 252 aaKnown RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 SFRP1Q8N474 314 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 GALNT6Q8NCL4 622 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 OR10G6Q8NH81 332 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 STAG3L4Q8TBR4 150 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 KIAA1143Q96AT1 154 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 AP2M1Q96CW1 435 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
VMP1-204ENST00000587259 CNDP1Q96KN2 507 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 NDNQ99608 321 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 MECRQ9BV79 373 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 ASPSCR1Q9BZE9 553 aa7.6□□□□□ -1.19
VMP1-204ENST00000587259 ULBP3Q9BZM4 244 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms