RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 CD9P21926 228 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 RORAP35398 523 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 CBSP35520 551 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 CCNFP41002 786 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 CLCN7P51798 805 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 PGDP52209 483 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 GPX6P59796 221 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 NAB1Q13506 487 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 IL10RAQ13651 578 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 ZC3H12BQ5HYM0 836 aaKnown RBP18■□□□□ 0.47
ATG4D-203ENST00000585752 LRRC8EQ6NSJ5 796 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 ZNF517Q6ZMY9 492 aaPredicted RBP18■□□□□ 0.47
ATG4D-203ENST00000585752 ZNF655Q8N720 491 aaPredicted RBP18■□□□□ 0.47
ATG4D-203ENST00000585752 PPM1NQ8N819 430 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 PROKR1Q8TCW9 393 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 DLG3Q92796 817 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 VPS39Q96JC1 886 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 CHRNA10Q9GZZ6 450 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 SPRTNQ9H040 489 aaPredicted RBP18■□□□□ 0.47
ATG4D-203ENST00000585752 EPN3Q9H201 632 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 FAM60AQ9NP50 221 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 IFT80Q9P2H3 777 aaPredicted RBP18■□□□□ 0.47
ATG4D-203ENST00000585752 CIDEBQ9UHD4 219 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 CDYLQ9Y232 598 aa18■□□□□ 0.47
ATG4D-203ENST00000585752 RASGRF2O14827 1237 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 ZSCAN9O15535 394 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-203ENST00000585752 DNAJB5O75953 348 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 ACSL3O95573 720 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 PIM1P11309 404 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-203ENST00000585752 NR1D1P20393 614 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 ALAS2P22557 587 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 DCDP81605 110 aaKnown RBP17.99■□□□□ 0.47
ATG4D-203ENST00000585752 NCF4Q15080 339 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 KLHL38Q2WGJ6 581 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 KBTBD12Q3ZCT8 623 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 ACSBG2Q5FVE4 666 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 RBM20Q5T481 1227 aaKnown RBP17.99■□□□□ 0.47
ATG4D-203ENST00000585752 HECTD2Q5U5R9 776 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 C1orf189Q5VU69 101 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 LCN10Q6JVE6 187 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 OR2L8Q8NGY9 312 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 CDC42EP4Q9H3Q1 356 aaKnown RBP17.99■□□□□ 0.47
ATG4D-203ENST00000585752 RHOJQ9H4E5 214 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 NINJ2Q9NZG7 142 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 VWA7Q9Y334 891 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 PSAT1Q9Y617 370 aa17.99■□□□□ 0.47
ATG4D-203ENST00000585752 FAM95CA0A1B0GW59 222 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 FAM159BA6NKW6 160 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 PEX12O00623 359 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 CATP04040 527 aaKnown RBP17.98■□□□□ 0.47
ATG4D-203ENST00000585752 TPBGLP0DKB5 382 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 MAGP20916 626 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 MCM3P25205 808 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 GABRB3P28472 473 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 OTX2P32243 289 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 SPRP35270 261 aaPredicted RBP17.98■□□□□ 0.47
ATG4D-203ENST00000585752 GP5P40197 560 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 FOLR3P41439 243 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 ARSFP54793 590 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 CHAF1BQ13112 559 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 RHBDD2Q6NTF9 364 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 NEK10Q6ZWH5 1172 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 MED25Q71SY5 747 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 ZC3HC1Q86WB0 502 aaKnown RBP17.98■□□□□ 0.47
ATG4D-203ENST00000585752 ATCAYQ86WG3 371 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 RELL1Q8IUW5 271 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 CPNE9Q8IYJ1 553 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 MYO1HQ8N1T3 1032 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 TMEM102Q8N9M5 508 aaPredicted RBP17.98■□□□□ 0.47
ATG4D-203ENST00000585752 CD200R1Q8TD46 325 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 TSPAN17Q96FV3 270 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 IP6K3Q96PC2 410 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 CYTH2Q99418 400 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 GALPQ9UBC7 116 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 IKBKGQ9Y6K9 419 aa17.98■□□□□ 0.47
ATG4D-203ENST00000585752 SEC16AO15027 2179 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 EIF3FO00303 357 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-203ENST00000585752 PIAS1O75925 651 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 FKBP9O95302 570 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 IGHEP01854 428 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 MPC1LP0DKB6 136 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 ECHS1P30084 290 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 CDKN2DP55273 166 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 SSPNQ14714 243 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 ZIC1Q15915 447 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 UAP1Q16222 522 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-203ENST00000585752 GRTP1Q5TC63 336 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 FAM198BQ6UWH4 519 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 DNAJC22Q8N4W6 341 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 TTC29Q8NA56 475 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-203ENST00000585752 IL17FQ96PD4 163 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 TRIM55Q9BYV6 548 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 SMYD2Q9NRG4 433 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 EURLQ9NYK6 297 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 PTRH2Q9Y3E5 179 aaKnown RBP17.97■□□□□ 0.47
ATG4D-203ENST00000585752 ZNF451Q9Y4E5 1061 aa17.97■□□□□ 0.47
ATG4D-203ENST00000585752 CXorf49A8MYA2 514 aaPredicted RBP17.96■□□□□ 0.47
ATG4D-203ENST00000585752 C1orf105O95561 183 aa17.96■□□□□ 0.47
ATG4D-203ENST00000585752 FDXRP22570 491 aa17.96■□□□□ 0.47
ATG4D-203ENST00000585752 BDKRB1P46663 353 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms