RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 VPS29Q9UBQ0 182 aa10.92□□□□□ -0.66
LIG3-204ENST00000585740 FAM8A1Q9UBU6 413 aa10.92□□□□□ -0.66
LIG3-204ENST00000585740 PCM1Q15154 2024 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 A0A096LPI6 279 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 K7ESM1 405 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PLK4O00444 970 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 KMOO15229 486 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 MID1O15344 667 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 LINC01565O15544 149 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PI15O43692 258 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PIM1P11309 404 aaPredicted RBP10.91□□□□□ -0.66
LIG3-204ENST00000585740 BMP2P12643 396 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PRPS1L1P21108 318 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 FASP25445 335 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 ACADLP28330 430 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PDHA2P29803 388 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 DRD3P35462 400 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 ASMTP46597 345 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 DGKQP52824 942 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PHEXP78562 749 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 NHLH1Q02575 133 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 SRSF11Q05519 484 aaKnown RBP10.91□□□□□ -0.66
LIG3-204ENST00000585740 RABL3Q5HYI8 236 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 SPANXN4Q5MJ08 99 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 TBCELQ5QJ74 424 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 AGBL4Q5VU57 503 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 ATG9BQ674R7 924 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 NOXRED1Q6NXP6 359 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 MED27Q6P2C8 311 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 LPCAT2Q7L5N7 544 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PDZD3Q86UT5 571 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 TRIM74Q86UV6 250 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 AMZ2Q86W34 360 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 SPPL2CQ8IUH8 684 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 DCUN1D3Q8IWE4 304 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 SFTPA1Q8IWL2 248 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 SYTL1Q8IYJ3 562 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 TBC1D21Q8IYX1 336 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 CHPFQ8IZ52 775 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 TMEM132CQ8N3T6 1108 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 HDDC3Q8N4P3 179 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 OXR1Q8N573 874 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 LILRA3Q8N6C8 439 aaPredicted RBP10.91□□□□□ -0.66
LIG3-204ENST00000585740 PACRGLQ8N7B6 248 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PAPD5Q8NDF8 572 aaKnown RBP10.91□□□□□ -0.66
LIG3-204ENST00000585740 PHC3Q8NDX5 983 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 TRPV3Q8NET8 790 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 CANT1Q8WVQ1 401 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 LRTOMTQ8WZ04 291 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 EME1Q96AY2 570 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 RAD51AP1Q96B01 352 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 SLCO4A1Q96BD0 722 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PPWD1Q96BP3 646 aaKnown RBP10.91□□□□□ -0.66
LIG3-204ENST00000585740 NSMCE2Q96MF7 247 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 CCDC115Q96NT0 180 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 NECTIN4Q96NY8 510 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 OR52E6Q96RD3 313 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 SGPP1Q9BX95 441 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 C1QTNF7Q9BXJ2 289 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 S1PR5Q9H228 398 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 YY1AP1Q9H869 796 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 SGK2Q9HBY8 427 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 PHPT1Q9NRX4 125 aaPredicted RBP10.91□□□□□ -0.66
LIG3-204ENST00000585740 SPATA6Q9NWH7 488 aaPredicted RBP10.91□□□□□ -0.66
LIG3-204ENST00000585740 PDP2Q9P2J9 529 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.91□□□□□ -0.66
LIG3-204ENST00000585740 EGFL7Q9UHF1 273 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 ANAPC2Q9UJX6 822 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 HCN2Q9UL51 889 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 TICRRQ7Z2Z1 1910 aa10.91□□□□□ -0.66
LIG3-204ENST00000585740 IGLON5A6NGN9 336 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 E7EQ34 232 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 TXNDC9O14530 226 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 AKAP10O43572 662 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 PRAMEF4O60810 478 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 KCNJ13O60928 360 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 PCDH8O95206 1070 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 SLC16A8O95907 504 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 PCCBP05166 539 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 ANXA6P08133 673 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 C1GALT1C1LP0DN25 315 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 SDC1P18827 310 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 TRPC1P48995 793 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 GALK1P51570 392 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 NEK2P51955 445 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 TBPL1P62380 186 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 CDK3Q00526 305 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 FOLH1Q04609 750 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 CYP4F3Q08477 520 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 ACSM2AQ08AH3 577 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 LRRC74AQ0VAA2 488 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 SFSWAPQ12872 951 aaKnown RBP10.9□□□□□ -0.66
LIG3-204ENST00000585740 STARD3Q14849 445 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 ARHGAP19Q14CB8 494 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 SPIN4Q56A73 249 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 RUNDC3AQ59EK9 446 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 LRIF1Q5T3J3 769 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 PRAMEF9Q5VWM5 478 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 ACSM2BQ68CK6 577 aa10.9□□□□□ -0.66
LIG3-204ENST00000585740 NAIF1Q69YI7 327 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms