RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 OR56A5P0C7T3 313 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 CDH1P12830 882 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 RPS9P46781 194 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 STARD6P59095 220 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 UFM1P61960 85 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 HPCAP84074 193 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 EPS8Q12929 822 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 LRRC32Q14392 662 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PAGE3Q5JUK9 113 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 USP30Q70CQ3 517 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 NLRP8Q86W28 1048 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 CPNE9Q8IYJ1 553 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 SIX5Q8N196 739 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PLA2G15Q8NCC3 412 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 DNAJB8Q8NHS0 232 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 B4GALNT2Q8NHY0 566 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 EEF1AKMT1Q8WVE0 214 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 HMGB4Q8WW32 186 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 KLK6Q92876 244 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 LINGO1Q96FE5 620 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 SHDQ96IW2 340 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 FOXQ1Q9C009 403 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 LTB4R2Q9NPC1 389 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 DDX18Q9NVP1 670 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 GIMAP2Q9UG22 337 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 FZD4Q9ULV1 537 aa14.57□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3DA0A087WVF3 549 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3IA0A087WXS9 549 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3EA0A087X179 549 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3KA0A087X1G2 549 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 MYOCOSA0A1B0GUC4 107 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3FA6NER0 549 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 FAM170BA6NMN3 283 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3LB9A6J9 549 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 RNGTTO60942 597 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 DEAF1O75398 565 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 GMNNO75496 209 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 OTCP00480 354 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 S100BP04271 92 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3HP0C7X1 549 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 JAK1P23458 1154 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 OXTRP30559 389 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 RAB15P59190 212 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 RPS21P63220 83 aaKnown RBP14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 FZD5Q13467 585 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 FGL2Q14314 439 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3GQ6DHY5 549 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3CQ6IPX1 549 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TTC23LQ6PF05 361 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 Q6ZSR9 355 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TBC1D3Q8IZP1 549 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 ZNF786Q8N393 782 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 SYNPOQ8N3V7 929 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 FNDC5Q8NAU1 212 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 GLB1L3Q8NCI6 653 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 BIRC7Q96CA5 298 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PPP3R2Q96LZ3 170 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 NSMCE2Q96MF7 247 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 CCDC115Q96NT0 180 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 DOK1Q99704 481 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 SH3GL1Q99961 368 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 POLMQ9NP87 494 aaPredicted RBP14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 C2orf42Q9NWW7 574 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 KCTD5Q9NXV2 234 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TMEM9Q9P0T7 183 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 IKZF3Q9UKT9 509 aa14.56□□□□□ -0.08
CDK5RAP3-236ENST00000584991 A0A1B0GTL3 188 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 A0A1B0GVG6 124 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 A0A1W2PQU0 124 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 OR2AG2A6NM03 316 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 CHURC1-FNTBB4DL54 471 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PLOD2O00469 737 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PAK4O96013 591 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 HPRP00739 348 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PCCBP05166 539 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PCSK6P29122 969 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 ADARB1P78563 741 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 SFSWAPQ12872 951 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TMEM115Q12893 351 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PWP1Q13610 501 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 GAS6Q14393 721 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 WSCD2Q2TBF2 565 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 CYBRD1Q53TN4 286 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 KIAA1161Q6NSJ0 714 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 SYT13Q7L8C5 426 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TRIM74Q86UV6 250 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 RIMKLAQ8IXN7 391 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PGBD3Q8N328 593 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 PDPRQ8NCN5 879 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 OR2T11Q8NH01 316 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 METTL6Q8TCB7 284 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 GAB3Q8WWW8 586 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 VPS33AQ96AX1 596 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 GORASP2Q9H8Y8 452 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 TRIOO75962 3097 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 RAD51BO15315 384 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 SGTAO43765 313 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 KATNA1O75449 491 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 WDR47O94967 919 aa14.55□□□□□ -0.08
CDK5RAP3-236ENST00000584991 AP2A2O94973 939 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms