RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 DYNLL2Q96FJ2 89 aa2.52□□□□□ -2.01
VAPA-208ENST00000584796 NUDT16L1Q9BRJ7 211 aaKnown RBP2.52□□□□□ -2.01
VAPA-208ENST00000584796 PCGF1Q9BSM1 259 aa2.52□□□□□ -2.01
VAPA-208ENST00000584796 USP44Q9H0E7 712 aa2.52□□□□□ -2.01
VAPA-208ENST00000584796 RAD21L1Q9H4I0 556 aa2.52□□□□□ -2.01
VAPA-208ENST00000584796 INTS10Q9NVR2 710 aaKnown RBP2.52□□□□□ -2.01
VAPA-208ENST00000584796 KLHL9Q9P2J3 617 aa2.52□□□□□ -2.01
VAPA-208ENST00000584796 TNNQ9UQP3 1299 aa2.52□□□□□ -2.01
VAPA-208ENST00000584796 GREB1Q4ZG55 1949 aa2.52□□□□□ -2.01
VAPA-208ENST00000584796 PDCD11Q14690 1871 aaKnown RBP2.52□□□□□ -2.01
VAPA-208ENST00000584796 UTP20O75691 2785 aaKnown RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 TEX15Q9BXT5 2789 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 ATG2BQ96BY7 2078 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 ELP1O95163 1332 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 SHROOM3Q8TF72 1996 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 FAM170AA1A519 330 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 TTC36A6NLP5 189 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 B4E171 279 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 LOC730098B7Z3J9 87 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 C19orf81C9J6K1 198 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 M0QZ24 198 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 BUD23O43709 281 aaKnown RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 DUSP11O75319 330 aaKnown RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 SEC31AO94979 1220 aaKnown RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 NADKO95544 446 aaPredicted RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 CLPTM1O96005 669 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 PLA2G4BP0C869 781 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 FAM157CP0CG43 387 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 AKR1B1P15121 316 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 GATA1P15976 413 aaPredicted RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 UBA1P22314 1058 aaKnown RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 TSPAN7P41732 249 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 NAP1L1P55209 391 aaKnown RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 KRTAP12-2P59991 146 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 SNAP25P60880 206 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 TFCP2Q12800 502 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 COL28A1Q2UY09 1125 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 RAB6CQ53S08 254 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 SPECC1Q5M775 1068 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 ADAMTSL4-AS1Q5T5F5 129 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 ITPRIPL1Q6GPH6 555 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 TATDN1Q6P1N9 297 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 ZNF613Q6PF04 617 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 FAM43BQ6ZT52 329 aaPredicted RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 SH2D5Q6ZV89 423 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 ARMCX2Q7L311 632 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 LRRTM4Q86VH4 590 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 FBXO16Q8IX29 292 aaPredicted RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 BMPERQ8N8U9 685 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 RDM1Q8NG50 284 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 IGSF8Q969P0 613 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 TREX2Q9BQ50 279 aaPredicted RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 TRIM51Q9BSJ1 452 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 RAB6CQ9H0N0 254 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 ALDH8A1Q9H2A2 487 aaPredicted RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 JMJD4Q9H9V9 463 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 TRPC7Q9HCX4 862 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 SIX2Q9NPC8 291 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 ASAH2Q9NR71 780 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 SLC6A13Q9NSD5 602 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 KCNJ14Q9UNX9 436 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 R4GN57 208 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 BAZ2BQ9UIF8 2168 aaKnown RBP2.51□□□□□ -2.01
VAPA-208ENST00000584796 COL4A2P08572 1712 aa2.51□□□□□ -2.01
VAPA-208ENST00000584796 COL12A1Q99715 3063 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 PIEZO2Q9H5I5 2752 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 MTCL1Q9Y4B5 1905 aaKnown RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 CCDC196A0A1B0GTZ2 297 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 A0A1B0GUL7 405 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 A0A1W2PNU3 283 aaPredicted RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 A6NLC8 198 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 HOXC11O43248 304 aaPredicted RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 PLOD3O60568 738 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 SRSF10O75494 262 aaKnown RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 FLOT1O75955 427 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 GFPT2O94808 682 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 GJB5O95377 273 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 TBX18O95935 607 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 IQCF3P0C7M6 154 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 TYMPP19971 482 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 NR2F2P24468 414 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 ITGA3P26006 1051 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 RAD52P43351 418 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 BMXP51813 675 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 CCNA1P78396 465 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 GABPAQ06546 454 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 GPM6BQ13491 265 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 COG2Q14746 738 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 CCNG2Q16589 344 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 EPC2Q52LR7 807 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 C1QTNF12Q5T7M4 302 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 GALNT5Q7Z7M9 940 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 TLK2Q86UE8 772 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 NKAIN3Q8N8D7 197 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 MRPL38Q96DV4 380 aaKnown RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 RSRC1Q96IZ7 334 aaKnown RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 GLT1D1Q96MS3 346 aa2.5□□□□□ -2.01
VAPA-208ENST00000584796 NAP1L5Q96NT1 182 aaPredicted RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 TGS1Q96RS0 853 aaKnown RBP2.5□□□□□ -2.01
VAPA-208ENST00000584796 PSD2Q9BQI7 771 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms