RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 PRDX3P30048 256 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 FOXN2P32314 431 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 RPA3P35244 121 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PRLHRP49683 370 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MRPL49Q13405 166 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ATP1A4Q13733 1029 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 NCF4Q15080 339 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 EIF2S3LQ2VIR3 472 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PTCHD3Q3KNS1 767 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZNF789Q5FWF6 425 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 LGSNQ5TDP6 509 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 VWA5B1Q5TIE3 1220 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 FAM69BQ5VUD6 431 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PACS1Q6VY07 963 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C4orf33Q8N1A6 199 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 LILRA3Q8N6C8 439 aaPredicted RBP9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 RBMXL3Q8N7X1 1067 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ANKRD42Q8N9B4 389 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 Q8NA96 180 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 BCAS4Q8TDM0 211 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MTBPQ96DY7 904 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MFSD3Q96ES6 412 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 IP6K3Q96PC2 410 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 RANBP9Q96S59 729 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SMC6Q96SB8 1091 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 COPS8Q99627 209 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SMAD5Q99717 465 aaKnown RBP9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MCMBPQ9BTE3 642 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PITPNM3Q9BZ71 974 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 COG4Q9H9E3 785 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 NKIRAS1Q9NYS0 192 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SAMD15Q9P1V8 674 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C5AR2Q9P296 337 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 IKBKGQ9Y6K9 419 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MED13Q9UHV7 2174 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SHANK1Q9Y566 2161 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ESPL1Q14674 2120 aa9.38□□□□□ -0.91
CDK5RAP3-227ENST00000583352 AGAP14A8MT82 685 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C2orf74A8MZ97 194 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TRIM49D1C9J1S8 452 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZNF749O43361 778 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 KLHL41O60662 606 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 KRT38O76015 456 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 FAM107AO95990 144 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 DHRS4L1P0CG22 281 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 RNF224P0DH78 156 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PYGBP11216 843 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ATP1B2P14415 290 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TAC1P20366 129 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CNTFP26441 200 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 OTX2P32243 289 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 HADHAP40939 763 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CCNFP41002 786 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CD151P48509 253 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TMPRSS15P98073 1019 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 XIAPP98170 497 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GRTP1Q5TC63 336 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 SNX20Q7Z614 316 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 AMIGO1Q86WK6 493 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 LRRC34Q8IZ02 419 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GPR135Q8IZ08 494 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 NXPE1Q8N323 547 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 OR52E1Q8NGJ3 308 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MGARPQ8TDB4 240 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZNF473Q8WTR7 871 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CDKL2Q92772 493 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 N4BP2L2Q92802 583 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZNF669Q96BR6 464 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CHMP6Q96FZ7 201 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CERS2Q96G23 380 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 FER1L6-AS2Q96M78 137 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZNF778Q96MU6 729 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TRAPPC9Q96Q05 1148 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 C17orf62Q9BQA9 187 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 KLHL25Q9H0H3 589 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 OR52A5Q9H2C5 316 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 RABEP2Q9H5N1 569 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TFB2MQ9H5Q4 396 aaKnown RBP9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 FAM96AQ9H5X1 160 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 MVB12BQ9H7P6 319 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TREX1Q9NSU2 369 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ACTR10Q9NZ32 417 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GPN3Q9UHW5 284 aaPredicted RBP9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 TCAF1Q9Y4C2 921 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PSAT1Q9Y617 370 aa9.37□□□□□ -0.91
CDK5RAP3-227ENST00000583352 BOD1L1Q8NFC6 3051 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GOLGA8RI6L899 631 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PEX12O00623 359 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 LDB2O43679 373 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ZWINTO95229 277 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 IGHEP01854 428 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 ALPPP05187 535 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CD63P08962 238 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PVRP15151 417 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 PSMA3P25788 255 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 CRHR1P34998 444 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 GP5P40197 560 aa9.36□□□□□ -0.91
CDK5RAP3-227ENST00000583352 FOLR3P41439 243 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms