RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 CCDC138Q96M89 665 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 LRFN5Q96NI6 719 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 RBBP8Q99708 897 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 SELENOSQ9BQE4 189 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 DPH7Q9BTV6 452 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 NDC1Q9BTX1 674 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 TRIM54Q9BYV2 358 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 FAM129AQ9BZQ8 928 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 CHST8Q9H2A9 424 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 CAB39LQ9H9S4 337 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 GPAMQ9HCL2 828 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 SLC6A20Q9NP91 592 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 CCDC177Q9NQR7 707 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 TXLNGQ9NUQ3 528 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 PCMTD2Q9NV79 361 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 ARL15Q9NXU5 204 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 STOX2Q9P2F5 926 aaPredicted RBP12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 KCND3Q9UK17 655 aa12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 MTO1Q9Y2Z2 717 aaKnown RBP12.1□□□□□ -0.47
SMARCE1-218ENST00000582955 A0A0J9YVX5 310 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 C21orf140B9A014 251 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 NKX2-8O15522 239 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 NRP2O60462 931 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 CTSVO60911 334 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 C1QAP02745 245 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 SPTBP11277 2137 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 AGXTP21549 392 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 PHBP35232 272 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 SPRP35270 261 aaPredicted RBP12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 RORAP35398 523 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 TBPL1P62380 186 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 RPS15P62841 145 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 MC1RQ01726 317 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 POU4F1Q01851 419 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 PRDX1Q06830 199 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 CDC20Q12834 499 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 USP10Q14694 798 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 EFTUD2Q15029 972 aaKnown RBP eCLIP12.09□□□□□ -0.471e-6■■■■□ 25.2
SMARCE1-218ENST00000582955 C1orf189Q5VU69 101 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 PRAMEF13Q5VWM6 474 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 TLDC1Q6P9B6 456 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 AGTRAPQ6RW13 159 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 TMEM207Q6UWW9 146 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 ADCK2Q7Z695 626 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 CEP97Q8IW35 865 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 EXTL1Q92935 676 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 TSPAN17Q96FV3 270 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 RUFY1Q96T51 708 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 FMO2Q99518 471 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 MCMBPQ9BTE3 642 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 ATG10Q9H0Y0 220 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 POPDC3Q9HBV1 291 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 UTP6Q9NYH9 597 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 SRPK3Q9UPE1 567 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 LOC400499M0QZD8 3231 aa12.09□□□□□ -0.47
SMARCE1-218ENST00000582955 MGAQ8IWI9 3026 aa12.08□□□□□ -0.47
SMARCE1-218ENST00000582955 OR2A25A4D2G3 310 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 NPEPPSL1A6NEC2 478 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 EIF4E1BA6NMX2 242 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 C9J4A7 227 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 H3BMH7 237 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 TERTO14746 1132 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 PHGDHO43175 533 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 FAM155BO75949 473 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 GUCA1CO95843 209 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 EIF2S1P05198 315 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 ENO2P09104 434 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 STMN1P16949 149 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 AP1S2P56377 157 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 VSX2P58304 361 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 RPS18P62269 152 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 ABATP80404 500 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 NAB1Q13506 487 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 NAE1Q13564 534 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 ERV3-1Q14264 604 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 SLMAPQ14BN4 828 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 TCTE1Q5JU00 501 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 ATP1A1-AS1Q5TC04 95 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 GRTP1Q5TC63 336 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 LCN10Q6JVE6 187 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 RHBDD2Q6NTF9 364 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 RNF44Q7L0R7 432 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 LRRC56Q8IYG6 542 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 TTC29Q8NA56 475 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 TTC9Q92623 222 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 MRRFQ96E11 262 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 PDLIM5Q96HC4 596 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 BBC3Q96PG8 261 aaPredicted RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 GPR22Q99680 433 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 ZFYVE21Q9BQ24 234 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 PLCD4Q9BRC7 762 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 ARHGAP9Q9BRR9 750 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 TSPYL1Q9H0U9 437 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 ACTL8Q9H568 366 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 STARD5Q9NSY2 213 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 NINJ2Q9NZG7 142 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 ANKMY1Q9P2S6 941 aa12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 DHCR7Q9UBM7 475 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-218ENST00000582955 CTNNAL1Q9UBT7 734 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms