RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GTF2H4Q92759 462 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 EZH1Q92800 747 aaPredicted RBP21.94■■□□□ 1.1
CCDC47-204ENST00000582252 TESCQ96BS2 214 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 FCRL1Q96LA6 429 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 PPM1MQ96MI6 270 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 TMEM74Q96NL1 305 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 OR52E6Q96RD3 313 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 GMPR2Q9P2T1 348 aaKnown RBP21.94■■□□□ 1.1
CCDC47-204ENST00000582252 GULP1Q9UBP9 304 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 VPS29Q9UBQ0 182 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 MAPRE3Q9UPY8 281 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 PCDHB3Q9Y5E6 796 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 DNMT3AQ9Y6K1 912 aaPredicted RBP21.94■■□□□ 1.1
CCDC47-204ENST00000582252 KLHL33A6NCF5 533 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 KRT87PA6NCN2 255 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 PRMT3O60678 531 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 PRAMEF4O60810 478 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 MYO1DO94832 1006 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 PCDH8O95206 1070 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 DRD3P35462 400 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 AGERQ15109 404 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 CCSMST1Q4G0I0 132 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 TBCELQ5QJ74 424 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 PRAMEF9Q5VWM5 478 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 ZNF776Q68DI1 518 aaPredicted RBP21.94■■□□□ 1.1
CCDC47-204ENST00000582252 CRTC3Q6UUV7 619 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 ADHFE1Q8IWW8 467 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 SYTL1Q8IYJ3 562 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 WDR20Q8TBZ3 569 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 LRTOMTQ8WZ04 291 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 STARD8Q92502 1023 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 GATA6Q92908 595 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 ZDHHC4Q9NPG8 344 aa21.94■■□□□ 1.1
CCDC47-204ENST00000582252 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.94■■□□□ 1.1
CCDC47-204ENST00000582252 RUVBL1Q9Y265 456 aaKnown RBP21.94■■□□□ 1.1
CCDC47-204ENST00000582252 COL6A3P12111 3177 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 AKAP10O43572 662 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 ERN1O75460 977 aaKnown RBP21.93■■□□□ 1.1
CCDC47-204ENST00000582252 PCCBP05166 539 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 MTX3Q5HYI7 312 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 AGBL4Q5VU57 503 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 TMEM154Q6P9G4 183 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.93■■□□□ 1.1
CCDC47-204ENST00000582252 ERMP1Q7Z2K6 904 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 LRRTM4Q86VH4 590 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 HEATR4Q86WZ0 1026 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 ZNF547Q8IVP9 402 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 SGK2Q9HBY8 427 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 PRDM6Q9NQX0 595 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 DUSP12Q9UNI6 340 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 DLGAP4Q9Y2H0 992 aa21.93■■□□□ 1.1
CCDC47-204ENST00000582252 GPR89AB7ZAQ6 455 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 TXNDC9O14530 226 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 EGFP01133 1207 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 GPR89BP0CG08 455 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 SDC1P18827 310 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 TEAD1P28347 426 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 SEC13P55735 322 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 E2F2Q14209 437 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 SLC44A4Q53GD3 710 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 PAGE2BQ5JRK9 111 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 NOXRED1Q6NXP6 359 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 AMZ2Q86W34 360 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 APLFQ8IW19 511 aaPredicted RBP21.92■■□□□ 1.1
CCDC47-204ENST00000582252 HDDC3Q8N4P3 179 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 KRTCAP2Q8N6L1 136 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 ZNF480Q8WV37 535 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 APIPQ96GX9 242 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 ITCHQ96J02 903 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 APOLD1Q96LR9 279 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 OR4K3Q96R72 315 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 SPATA6Q9NWH7 488 aaPredicted RBP21.92■■□□□ 1.1
CCDC47-204ENST00000582252 AURKCQ9UQB9 309 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 IGLON5A6NGN9 336 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 RPN2P04844 631 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 CD22P20273 847 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 PRPS1L1P21108 318 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 TIE1P35590 1138 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 WASP42768 502 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 HNRNPFP52597 415 aaKnown RBP21.92■■□□□ 1.1
CCDC47-204ENST00000582252 TBPL1P62380 186 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 CDK3Q00526 305 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 FOLH1Q04609 750 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 CYP51A1Q16850 503 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 ANKFN1Q8N957 763 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 CLHC1Q8NHS4 586 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 FOXJ1Q92949 421 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 EFCAB11Q9BUY7 163 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 KCNH6Q9H252 994 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 FBRSQ9HAH7 460 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 PRM3Q9NNZ6 103 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 THEGQ9P2T0 379 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 ANAPC2Q9UJX6 822 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 MAN2B2Q9Y2E5 1009 aa21.92■■□□□ 1.1
CCDC47-204ENST00000582252 A0A096LPI6 279 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 DENRO43583 198 aaKnown RBP21.91■■□□□ 1.1
CCDC47-204ENST00000582252 FASP25445 335 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 NTSR1P30989 418 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 ZP2Q05996 745 aa21.91■■□□□ 1.1
CCDC47-204ENST00000582252 NFE2L1Q14494 772 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms