RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 NEPROQ6NW34 567 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 CENPUQ71F23 418 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 OVCH1Q7RTY7 1134 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 PPP1R32Q7Z5V6 425 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 RBMXL3Q8N7X1 1067 aaKnown RBP20.04■□□□□ 0.8
CCDC42-203ENST00000581598 TTC29Q8NA56 475 aaPredicted RBP20.04■□□□□ 0.8
CCDC42-203ENST00000581598 CLEC1AQ8NC01 280 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 OR2L3Q8NG85 312 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 OR2A1Q8NGT9 310 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 SKA2Q8WVK7 121 aaPredicted RBP20.04■□□□□ 0.8
CCDC42-203ENST00000581598 PNPLA2Q96AD5 504 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 SELENOSQ9BQE4 189 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 XAB2Q9HCS7 855 aaKnown RBP20.04■□□□□ 0.8
CCDC42-203ENST00000581598 CUTCQ9NTM9 273 aa20.04■□□□□ 0.8
CCDC42-203ENST00000581598 A6NL46 340 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 GOLGA8KD6RF30 607 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 GOLGA8TH3BQL2 631 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 DNALI1O14645 258 aaPredicted RBP20.03■□□□□ 0.8
CCDC42-203ENST00000581598 VPS4BO75351 444 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 AVILO75366 819 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 RHOXF2BP0C7M4 288 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 PKMP14618 531 aaKnown RBP20.03■□□□□ 0.8
CCDC42-203ENST00000581598 RPL21P46778 160 aaKnown RBP20.03■□□□□ 0.8
CCDC42-203ENST00000581598 SLC9A5Q14940 896 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 FAM214AQ32MH5 1076 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 ANKRD22Q5VYY1 191 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 SLC6A19Q695T7 634 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 CNSTQ6PJW8 725 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 NEK10Q6ZWH5 1172 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 GALNT16Q8N428 558 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 RHOXF2Q9BQY4 288 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 ANKZF1Q9H8Y5 726 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 SAMD15Q9P1V8 674 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 KLHL42Q9P2K6 505 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 VPS4AQ9UN37 437 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 RUVBL2Q9Y230 463 aaKnown RBP20.03■□□□□ 0.8
CCDC42-203ENST00000581598 CRYL1Q9Y2S2 319 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 FAM169AQ9Y6X4 670 aa20.03■□□□□ 0.8
CCDC42-203ENST00000581598 SDR42E2A6NKP2 422 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 CTSVO60911 334 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 PSIP1O75475 530 aaKnown RBP20.02■□□□□ 0.8
CCDC42-203ENST00000581598 SEC31AO94979 1220 aaKnown RBP20.02■□□□□ 0.8
CCDC42-203ENST00000581598 CHRM3P20309 590 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 MMP11P24347 488 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 PSMB5P28074 263 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 GUCY2DQ02846 1103 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 ARHGAP19Q14CB8 494 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 ANKRD20A4Q4UJ75 823 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 IGFL3Q6UXB1 125 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 COX15Q7KZN9 410 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 RNF44Q7L0R7 432 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 Q8NA96 180 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 OR9A1PQ8NGU1 263 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 SNF8Q96H20 258 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 SPSB2Q99619 263 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 MIPEPQ99797 713 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 TRIM31Q9BZY9 425 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 GRHL1Q9NZI5 618 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 WHRNQ9P202 907 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 NXT1Q9UKK6 140 aaKnown RBP20.02■□□□□ 0.8
CCDC42-203ENST00000581598 HEATR5BQ9P2D3 2071 aa20.02■□□□□ 0.8
CCDC42-203ENST00000581598 OR2A25A4D2G3 310 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 AGPSO00116 658 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 MYO1CO00159 1063 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 TP73O15350 636 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 IPO13O94829 963 aaKnown RBP20.01■□□□□ 0.79
CCDC42-203ENST00000581598 ALPPP05187 535 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 MCM3P25205 808 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 INPP5JQ15735 1006 aaPredicted RBP20.01■□□□□ 0.79
CCDC42-203ENST00000581598 NKG7Q16617 165 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 ERCC6LQ2NKX8 1250 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.01■□□□□ 0.79
CCDC42-203ENST00000581598 RNASEH2BQ5TBB1 312 aaKnown RBP20.01■□□□□ 0.79
CCDC42-203ENST00000581598 CASC4Q6P4E1 433 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 LMNTD2Q8IXW0 634 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 BBOF1Q8ND07 529 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 MYRIPQ8NFW9 859 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 SERPINB12Q96P63 405 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 ZNF552Q9H707 407 aaPredicted RBP20.01■□□□□ 0.79
CCDC42-203ENST00000581598 ATP13A2Q9NQ11 1180 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 SLAMF7Q9NQ25 335 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 FAM114A2Q9NRY5 505 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 GALPQ9UBC7 116 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 SNX24Q9Y343 169 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 USP9XQ93008 2570 aaPredicted RBP20.01■□□□□ 0.79
CCDC42-203ENST00000581598 DOCK10Q96BY6 2186 aa20.01■□□□□ 0.79
CCDC42-203ENST00000581598 ESPL1Q14674 2120 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 ZCWPW2A0A1B0GU75 182 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 KRT87PA6NCN2 255 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 ARHGEF33A8MVX0 844 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 E5RI56 91 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 NDC80O14777 642 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 CTIFO43310 598 aaKnown RBP20■□□□□ 0.79
CCDC42-203ENST00000581598 CMPK1P30085 196 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 HSD17B2P37059 387 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 MAGEA3P43357 314 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 CLCN7P51798 805 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 EMP3P54852 163 aa20■□□□□ 0.79
CCDC42-203ENST00000581598 VSX2P58304 361 aaPredicted RBP20■□□□□ 0.79
CCDC42-203ENST00000581598 KLHL38Q2WGJ6 581 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms