RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 CCNFP41002 786 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 EMP3P54852 163 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 VSX2P58304 361 aaPredicted RBP10.12□□□□□ -0.79
RFFL-209ENST00000581265 OCA2Q04671 838 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 KLC1Q07866 573 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 CDC16Q13042 620 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 MFAP5Q13361 173 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 CCSMST1Q4G0I0 132 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 FRMPD2BQ6IN97 320 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 FBXO42Q6P3S6 717 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 RNF44Q7L0R7 432 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 OTOAQ7RTW8 1153 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 PRUNE1Q86TP1 453 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 SLC13A5Q86YT5 568 aaPredicted RBP10.12□□□□□ -0.79
RFFL-209ENST00000581265 OR4N4Q8N0Y3 316 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 DTWD1Q8N5C7 304 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 PPHLN1Q8NEY8 458 aaKnown RBP10.12□□□□□ -0.79
RFFL-209ENST00000581265 STT3BQ8TCJ2 826 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 MAGEC3Q8TD91 643 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 C1orf54Q8WWF1 131 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 THOC3Q96J01 351 aaKnown RBP10.12□□□□□ -0.79
RFFL-209ENST00000581265 MIPEPQ99797 713 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 SLX1AQ9BQ83 275 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 CRB3Q9BUF7 120 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 EIF2B3Q9NR50 452 aaKnown RBP10.12□□□□□ -0.79
RFFL-209ENST00000581265 PAK5Q9P286 719 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 ZNF282Q9UDV7 671 aaPredicted RBP10.12□□□□□ -0.79
RFFL-209ENST00000581265 ZC3H7BQ9UGR2 993 aaKnown RBP10.12□□□□□ -0.79
RFFL-209ENST00000581265 GNPTGQ9UJJ9 305 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 NFS1Q9Y697 457 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 MAU2Q9Y6X3 613 aa10.12□□□□□ -0.79
RFFL-209ENST00000581265 CRYBG3Q68DQ2 2970 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 ITPR3Q14573 2671 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 A0A0J9YVX5 310 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 A0A1W2PQ72 361 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 OR2A25A4D2G3 310 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 AP3B1O00203 1094 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 DIAPH2O60879 1101 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 NDUFS3O75489 264 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 MED26O95402 600 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 MATN4O95460 622 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 ZGLP1P0C6A0 271 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 ACPPP15309 386 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 PSMB5P28074 263 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 RPL22P35268 128 aaKnown RBP10.11□□□□□ -0.79
RFFL-209ENST00000581265 NPY2RP49146 381 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 NAA25Q14CX7 972 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 CCNG2Q16589 344 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 MUM1Q2TAK8 710 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 PRTGQ2VWP7 1150 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 SEL1L2Q5TEA6 688 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 METTL27Q8N6F8 245 aaPredicted RBP10.11□□□□□ -0.79
RFFL-209ENST00000581265 CCDC89Q8N998 374 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 CATSPER1Q8NEC5 780 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 SKA2Q8WVK7 121 aaPredicted RBP10.11□□□□□ -0.79
RFFL-209ENST00000581265 PSMF1Q92530 271 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 MIEF2Q96C03 454 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 FOPNLQ96NB1 174 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 BIRC8Q96P09 236 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 MESP1Q9BRJ9 268 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 TRIM56Q9BRZ2 755 aaKnown RBP10.11□□□□□ -0.79
RFFL-209ENST00000581265 DESI2Q9BSY9 194 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 IL22Q9GZX6 179 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 C3orf18Q9UK00 162 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 CDC14AQ9UNH5 594 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 OSGIN2Q9Y236 505 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 DRG1Q9Y295 367 aaKnown RBP10.11□□□□□ -0.79
RFFL-209ENST00000581265 CAPN6Q9Y6Q1 641 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 FAM169AQ9Y6X4 670 aa10.11□□□□□ -0.79
RFFL-209ENST00000581265 NUP210LQ5VU65 1888 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 PRSS44E7EML9 344 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 NRP2O60462 931 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 PHF2O75151 1096 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 USP1O94782 785 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 EIF2S1P05198 315 aaKnown RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 STSP08842 583 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ZSCAN5DPP0CG00 497 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ERGP11308 486 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 FDXRP22570 491 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ARNTP27540 789 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 NMBRP28336 390 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ATP5DP30049 168 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 BDKRB1P46663 353 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ADARP55265 1226 aaKnown RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 SESN2P58004 480 aaPredicted RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 YBX1P67809 324 aaKnown RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 CRADDP78560 199 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 SNX1Q13596 522 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 FASTKQ14296 549 aaKnown RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 GBX1Q14549 363 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ARHGAP19Q14CB8 494 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ZRSR2Q15696 482 aaKnown RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 VWA2Q5GFL6 755 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 CTSL3PQ5NE16 218 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 ZNF324BQ6AW86 544 aaPredicted RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 DRICH1Q6PGQ1 229 aaPredicted RBP10.1□□□□□ -0.79
RFFL-209ENST00000581265 C4orf22Q6V702 233 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 LINC00696Q6ZRV3 163 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 NDUFAF7Q7L592 441 aa10.1□□□□□ -0.79
RFFL-209ENST00000581265 SDCCAG8Q86SQ7 713 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms