RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 KCTD11Q693B1 232 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
NDEL1-209ENST00000580738 NEK10Q6ZWH5 1172 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 CDKL3Q8IVW4 592 aaPredicted RBP18.18■□□□□ 0.5
NDEL1-209ENST00000580738 DCUN1D3Q8IWE4 304 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 KLHDC8BQ8IXV7 354 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 CHTF18Q8WVB6 975 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 CCDC42Q96M95 316 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 MIPEPQ99797 713 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 SPOCK3Q9BQ16 436 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 FERMT1Q9BQL6 677 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 YIPF2Q9BWQ6 316 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 NHEJ1Q9H9Q4 299 aaPredicted RBP18.18■□□□□ 0.5
NDEL1-209ENST00000580738 RIC8BQ9NVN3 520 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 TRPC4Q9UBN4 977 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 SLC39A10Q9ULF5 831 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 ZNF835Q9Y2P0 537 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 MEMO1Q9Y316 297 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 NEU2Q9Y3R4 380 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 NAV3Q8IVL0 2385 aa18.18■□□□□ 0.5
NDEL1-209ENST00000580738 CACNA1CQ13936 2221 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 CCDC162PA2VCL2 907 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 KRT87PA6NCN2 255 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 GPC4O75487 556 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 STK10O94804 968 aaKnown RBP18.17■□□□□ 0.5
NDEL1-209ENST00000580738 RBP3P10745 1247 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 EIF3EP60228 445 aaKnown RBP18.17■□□□□ 0.5
NDEL1-209ENST00000580738 YBX1P67809 324 aaKnown RBP18.17■□□□□ 0.5
NDEL1-209ENST00000580738 ZNF33BQ06732 778 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 SPPL2CQ8IUH8 684 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 LKAAEAR1Q8TD35 194 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 MAGED4Q96JG8 741 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 ZNF700Q9H0M5 742 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 TSPAN10Q9H1Z9 355 aaPredicted RBP18.17■□□□□ 0.5
NDEL1-209ENST00000580738 FAM169AQ9Y6X4 670 aa18.17■□□□□ 0.5
NDEL1-209ENST00000580738 CPAMD8Q8IZJ3 1885 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 SPG11Q96JI7 2443 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 MROH6A6NGR9 719 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 IQCF5A8MTL0 148 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 FAM227AF5H4B4 570 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 ZNHIT1O43257 154 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 RPN2P04844 631 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 HEXBP07686 556 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 PSMA3P25788 255 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 EFNA3P52797 238 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 CSNK1G2P78368 415 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 DSG2Q14126 1118 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 MUM1Q2TAK8 710 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 CCDC38Q502W7 563 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 ZNF766Q5HY98 468 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 UNC5DQ6UXZ4 953 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 Q6ZPB1 254 aaPredicted RBP18.16■□□□□ 0.5
NDEL1-209ENST00000580738 CABS1Q96KC9 395 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 ALS2CR12Q96Q35 445 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 ENKD1Q9H0I2 346 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 ZNHIT6Q9NWK9 470 aaKnown RBP18.16■□□□□ 0.5
NDEL1-209ENST00000580738 KLK4Q9Y5K2 254 aa18.16■□□□□ 0.5
NDEL1-209ENST00000580738 LOC102723996A0A087X1L8 192 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 FKBP9O95302 570 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 METTL18O95568 372 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 MYBL2P10244 700 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 ST13P50502 369 aaKnown RBP18.15■□□□□ 0.5
NDEL1-209ENST00000580738 PRTGQ2VWP7 1150 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 CCSMST1Q4G0I0 132 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 CAVIN1Q6NZI2 390 aaKnown RBP18.15■□□□□ 0.5
NDEL1-209ENST00000580738 FBXO42Q6P3S6 717 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 RNF44Q7L0R7 432 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 AMER3Q8N944 861 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 ACBD4Q8NC06 268 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 OR2L3Q8NG85 312 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 OR2A1Q8NGT9 310 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 THAP3Q8WTV1 239 aaPredicted RBP18.15■□□□□ 0.5
NDEL1-209ENST00000580738 ASZ1Q8WWH4 475 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 LRRC45Q96CN5 670 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 IMMP1LQ96LU5 166 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 GPR137Q96N19 417 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 PPP1R2P1Q96PQ5 205 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 SYNPO2LQ9H987 977 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 GPAMQ9HCL2 828 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 INTUQ9ULD6 942 aa18.15■□□□□ 0.5
NDEL1-209ENST00000580738 A8MUI8 341 aa18.14■□□□□ 0.49
NDEL1-209ENST00000580738 ERVK-10P10266 1014 aa18.14■□□□□ 0.49
NDEL1-209ENST00000580738 CTNNA2P26232 953 aa18.14■□□□□ 0.49
NDEL1-209ENST00000580738 LONRF1Q17RB8 773 aa18.14■□□□□ 0.49
NDEL1-209ENST00000580738 SYT16Q17RD7 645 aa18.14■□□□□ 0.49
NDEL1-209ENST00000580738 MEX3BQ6ZN04 569 aaKnown RBP18.14■□□□□ 0.49
NDEL1-209ENST00000580738 HES7Q9BYE0 225 aa18.14■□□□□ 0.49
NDEL1-209ENST00000580738 ABHD10Q9NUJ1 306 aa18.14■□□□□ 0.49
NDEL1-209ENST00000580738 C14orf105Q9NVL8 296 aa18.14■□□□□ 0.49
NDEL1-209ENST00000580738 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.14■□□□□ 0.49
NDEL1-209ENST00000580738 A0A1W2PPV9 198 aa18.13■□□□□ 0.49
NDEL1-209ENST00000580738 NPIPA5E9PKD4 350 aa18.13■□□□□ 0.49
NDEL1-209ENST00000580738 H0YGG7 62 aa18.13■□□□□ 0.49
NDEL1-209ENST00000580738 PJA2O43164 708 aa18.13■□□□□ 0.49
NDEL1-209ENST00000580738 ICAM2P13598 275 aa18.13■□□□□ 0.49
NDEL1-209ENST00000580738 AOAHP28039 575 aa18.13■□□□□ 0.49
NDEL1-209ENST00000580738 SLC26A3P40879 764 aa18.13■□□□□ 0.49
NDEL1-209ENST00000580738 HADHBP55084 474 aaKnown RBP18.13■□□□□ 0.49
NDEL1-209ENST00000580738 ARF3P61204 181 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms