RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 CYB5D1Q6P9G0 228 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 SPESP1Q6UW49 350 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 CEACAM20Q6UY09 585 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 CMC1Q7Z7K0 106 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 LINC01555Q8NAE3 123 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 FLVCR1-AS1Q8TAF5 88 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 RHEBL1Q8TAI7 183 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 MZB1Q8WU39 189 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 ATL1Q8WXF7 558 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 KLHL6Q8WZ60 621 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 SMPDL3AQ92484 453 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 KIAA1191Q96A73 305 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 MRRFQ96E11 262 aaKnown RBP9.54□□□□□ -0.88
GGA3-209ENST00000580646 TGM7Q96PF1 710 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 PKP4Q99569 1192 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 CTRCQ99895 268 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 ZPBPQ9BS86 351 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 SPRY4Q9C004 299 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 APMAPQ9HDC9 416 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 ACTR10Q9NZ32 417 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 CTNNAL1Q9UBT7 734 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 TLK1Q9UKI8 766 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 ADAMTS6Q9UKP5 1117 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 KLK4Q9Y5K2 254 aa9.54□□□□□ -0.88
GGA3-209ENST00000580646 TRIM49D1C9J1S8 452 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 E7ENX8 843 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 POLR1CO15160 346 aaPredicted RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 RAD1O60671 282 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 RFPL1O75677 317 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 C1QL1O75973 258 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 SLC16A8O95907 504 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 SHBGP04278 402 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 POLR2CP19387 275 aaPredicted RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 WT1P19544 449 aaPredicted RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 IMPA1P29218 277 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 OAS2P29728 719 aaKnown RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 PRDX3P30048 256 aaKnown RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 SEPHS1P49903 392 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 HNMTP50135 292 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 KPNA2P52292 529 aaKnown RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 PGGT1BP53609 377 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 PNLIPRP1P54315 467 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 TAP2Q03519 686 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 C19orf57Q0VDD7 668 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 CSHL1Q14406 222 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 ACAP2Q15057 778 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 PHKG1Q16816 387 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 TSNAXIP1Q2TAA8 658 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 SWT1Q5T5J6 900 aaKnown RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 CACHD1Q5VU97 1274 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 IRGCQ6NXR0 463 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 KLC3Q6P597 504 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 CROCCP2Q86T23 111 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 ISCA2Q86U28 154 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 LURAP1LQ8IV03 231 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 KLHDC8AQ8IYD2 350 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 LRRC56Q8IYG6 542 aaPredicted RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 CACNA2D3Q8IZS8 1091 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 CENPLQ8N0S6 344 aaPredicted RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 TCAIMQ8N3R3 496 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 IL22RA1Q8N6P7 574 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 ZSCAN1Q8NBB4 408 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 PDPRQ8NCN5 879 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 STAG3L4Q8TBR4 150 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 ZNF480Q8WV37 535 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 FBXL8Q96CD0 374 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 SLC41A2Q96JW4 573 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 OR2A14Q96R47 310 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 PCBD2Q9H0N5 130 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 XKR8Q9H6D3 395 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 SIDT1Q9NXL6 827 aaKnown RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 STOX2Q9P2F5 926 aaPredicted RBP9.53□□□□□ -0.88
GGA3-209ENST00000580646 ANKMY1Q9P2S6 941 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 LGALS13Q9UHV8 139 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 PILRAQ9UKJ1 303 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 PLAGL1Q9UM63 463 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 BTRCQ9Y297 605 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 PCDHGA4Q9Y5G9 962 aa9.53□□□□□ -0.88
GGA3-209ENST00000580646 TENM4Q6N022 2769 aa9.52□□□□□ -0.88
GGA3-209ENST00000580646 A0A0J9YY10 115 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 A0A1W2PPV9 198 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 GSAPA4D1B5 854 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 NPEPPSL1A6NEC2 478 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 ERICH4A6NGS2 130 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 SYCE1LA8MT33 242 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 TARM1B6A8C7 271 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 CDC7O00311 574 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 KERAO60938 352 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 RASSF9O75901 435 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 CCNDBP1O95273 360 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 ZBTB11O95625 1053 aaPredicted RBP9.52□□□□□ -0.89
GGA3-209ENST00000580646 SYF2O95926 243 aaKnown RBP9.52□□□□□ -0.89
GGA3-209ENST00000580646 GSTA1P08263 222 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 ANXA5P08758 320 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 UGT2B7P16662 529 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 NELFEP18615 380 aaKnown RBP9.52□□□□□ -0.89
GGA3-209ENST00000580646 CDH3P22223 829 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 PEBP1P30086 187 aaKnown RBP9.52□□□□□ -0.89
GGA3-209ENST00000580646 GGT5P36269 586 aa9.52□□□□□ -0.89
GGA3-209ENST00000580646 HNRNPH2P55795 449 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms