RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 PCID2Q5JVF3 399 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 MTFR2Q6P444 385 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 MICALCLQ6ZW33 695 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 COX15Q7KZN9 410 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 SDCCAG8Q86SQ7 713 aaPredicted RBP17.09■□□□□ 0.33
MKS1-209ENST00000580127 METTL27Q8N6F8 245 aaPredicted RBP17.09■□□□□ 0.33
MKS1-209ENST00000580127 CCDC89Q8N998 374 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 SUN3Q8TAQ9 357 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 MIPEPQ99797 713 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 LACRTQ9GZZ8 138 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 ZNF160Q9HCG1 818 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 RAB6BQ9NRW1 208 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 SUCOQ9UBS9 1254 aaKnown RBP17.09■□□□□ 0.33
MKS1-209ENST00000580127 TCAF1Q9Y4C2 921 aa17.09■□□□□ 0.33
MKS1-209ENST00000580127 SPENQ96T58 3664 aaKnown RBP17.09■□□□□ 0.33
MKS1-209ENST00000580127 MYO7BQ6PIF6 2116 aa17.08■□□□□ 0.33
MKS1-209ENST00000580127 A0A0J9YVX5 310 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 ARHGAP10A1A4S6 786 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 TXNDC9O14530 226 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 PRICKLE3O43900 615 aaPredicted RBP17.08■□□□□ 0.32
MKS1-209ENST00000580127 ZG16O60844 167 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 CTSVO60911 334 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 KLHL18O94889 574 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 C1orf105O95561 183 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 CRYABP02511 175 aaKnown RBP17.08■□□□□ 0.32
MKS1-209ENST00000580127 APRTP07741 180 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.08■□□□□ 0.32
MKS1-209ENST00000580127 ATG9BQ674R7 924 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 CNSTQ6PJW8 725 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 C4orf22Q6V702 233 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 RIPOR1Q6ZS17 1223 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 FJX1Q86VR8 437 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 PRSS58Q8IYP2 241 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 KRT222Q8N1A0 295 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 CATSPER1Q8NEC5 780 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 OR2L3Q8NG85 312 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 HAS2Q92819 552 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 RELTQ969Z4 430 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 MVB12AQ96EY5 273 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 CABS1Q96KC9 395 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 ZFYVE21Q9BQ24 234 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 SLX1AQ9BQ83 275 aa17.08■□□□□ 0.32
MKS1-209ENST00000580127 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.08■□□□□ 0.32
MKS1-209ENST00000580127 R3HDM2Q9Y2K5 976 aaKnown RBP17.08■□□□□ 0.32
MKS1-209ENST00000580127 PRSS44E7EML9 344 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 H3BMM5 538 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 BMP10O95393 424 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 SERPINA7P05543 415 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 ANXA5P08758 320 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 PKMP14618 531 aaKnown RBP17.07■□□□□ 0.32
MKS1-209ENST00000580127 HSD17B2P37059 387 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 NPY2RP49146 381 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 TMEM207Q6UWW9 146 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 ZNF534Q76KX8 674 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 TMEM151BQ8IW70 566 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 OTUD6BQ8N6M0 293 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 DNAJB8Q8NHS0 232 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 PHF12Q96QT6 1004 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 CHRAC1Q9NRG0 131 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 C14orf105Q9NVL8 296 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 BFARQ9NZS9 450 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 SPATA7Q9P0W8 599 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 PAK5Q9P286 719 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 PTGFRNQ9P2B2 879 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 TRPC4Q9UBN4 977 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 TEKT2Q9UIF3 430 aa17.07■□□□□ 0.32
MKS1-209ENST00000580127 LOC105369274A0A096LPK9 316 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 LOC102723532A0A0G2JNH3 316 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 ZNF839A8K0R7 811 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 E2F3O00716 465 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 HEXBP07686 556 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 PRR35P0CG20 571 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 RPS3P23396 243 aaKnown RBP eCLIP17.06■□□□□ 0.32
MKS1-209ENST00000580127 RPA3P35244 121 aaPredicted RBP17.06■□□□□ 0.32
MKS1-209ENST00000580127 CASP6P55212 293 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 RBPJQ06330 500 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 Q0VFX4 171 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 ART3Q13508 389 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 ANKRD20A4Q4UJ75 823 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 SEL1L2Q5TEA6 688 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 FRMPD2BQ6IN97 320 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 MRNIPQ6NTE8 343 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 GFRALQ6UXV0 394 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 OR4N4Q8N0Y3 316 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 OR2A1Q8NGT9 310 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 SMPDL3AQ92484 453 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 RERGQ96A58 199 aaPredicted RBP17.06■□□□□ 0.32
MKS1-209ENST00000580127 ZNF778Q96MU6 729 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 DPH7Q9BTV6 452 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 IL22Q9GZX6 179 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 MKKSQ9NPJ1 570 aaPredicted RBP17.06■□□□□ 0.32
MKS1-209ENST00000580127 FAM114A2Q9NRY5 505 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 RIC8BQ9NVN3 520 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 PACSIN2Q9UNF0 486 aaPredicted RBP17.06■□□□□ 0.32
MKS1-209ENST00000580127 DRG1Q9Y295 367 aaKnown RBP17.06■□□□□ 0.32
MKS1-209ENST00000580127 LRBAP50851 2863 aa17.06■□□□□ 0.32
MKS1-209ENST00000580127 IGLV3-12A0A075B6K2 115 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 IDSB3KWA1 339 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 LIASO43766 372 aa17.05■□□□□ 0.32
MKS1-209ENST00000580127 CCNDBP1O95273 360 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms