RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 MCM3P25205 808 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 GCGRP47871 477 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 OR1D4P47884 311 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 VPS41P49754 854 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 AP2B1P63010 937 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 DHX34Q14147 1143 aaKnown RBP13.11□□□□□ -0.31
GGA3-208ENST00000579743 EIF2S3LQ2VIR3 472 aaKnown RBP13.11□□□□□ -0.31
GGA3-208ENST00000579743 KLHL38Q2WGJ6 581 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 CTSL3PQ5NE16 218 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 CES3Q6UWW8 571 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 NEK10Q6ZWH5 1172 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 OR2A1Q8NGT9 310 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 DNAJB14Q8TBM8 379 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 PPP4R1Q8TF05 950 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 SPSB2Q99619 263 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 ACAT2Q9BWD1 397 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 YIPF2Q9BWQ6 316 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 SOX17Q9H6I2 414 aaPredicted RBP13.11□□□□□ -0.31
GGA3-208ENST00000579743 SLC6A20Q9NP91 592 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 SLC22A11Q9NSA0 550 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 KLHL42Q9P2K6 505 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 TSR3Q9UJK0 312 aaKnown RBP13.11□□□□□ -0.31
GGA3-208ENST00000579743 COMMD10Q9Y6G5 202 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 MAU2Q9Y6X3 613 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 NAV2Q8IVL1 2488 aa13.11□□□□□ -0.31
GGA3-208ENST00000579743 FAM237BA0A1B0GVD1 139 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 ANKUB1A6NFN9 424 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 GOLGA8KD6RF30 607 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 GOLGA8TH3BQL2 631 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 ZBTB14O43829 449 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 CTSVO60911 334 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 MYBL2P10244 700 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 ENO3P13929 434 aaPredicted RBP13.1□□□□□ -0.31
GGA3-208ENST00000579743 PSMB5P28074 263 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 CXCR5P32302 372 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 TERF1P54274 439 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 ABATP80404 500 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 TLR1Q15399 786 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 NR6A1Q15406 480 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 TRIP13Q15645 432 aaPredicted RBP13.1□□□□□ -0.31
GGA3-208ENST00000579743 NDUFA9Q16795 377 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 PRR30Q53SZ7 412 aaPredicted RBP13.1□□□□□ -0.31
GGA3-208ENST00000579743 THEMIS2Q5TEJ8 643 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 GARNL3Q5VVW2 1013 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 ZNF470Q6ECI4 717 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 Q6ZS92 163 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 SHISA6Q6ZSJ9 500 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 RNF44Q7L0R7 432 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 CILP2Q8IUL8 1156 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 LRRC8AQ8IWT6 810 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 PALM2Q8IXS6 379 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 METTL27Q8N6F8 245 aaPredicted RBP13.1□□□□□ -0.31
GGA3-208ENST00000579743 STT3BQ8TCJ2 826 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 MAGOHBQ96A72 148 aaKnown RBP13.1□□□□□ -0.31
GGA3-208ENST00000579743 THOC3Q96J01 351 aaKnown RBP13.1□□□□□ -0.31
GGA3-208ENST00000579743 PBKQ96KB5 322 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 C5orf34Q96MH7 638 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 C14orf105Q9NVL8 296 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 ASF1BQ9NVP2 202 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 CTSFQ9UBX1 484 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 RUVBL2Q9Y230 463 aaKnown RBP13.1□□□□□ -0.31
GGA3-208ENST00000579743 SLC5A6Q9Y289 635 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 HS3ST3B1Q9Y662 390 aa13.1□□□□□ -0.31
GGA3-208ENST00000579743 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 GOLGA6L10A0A0M3HER8 536 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 OR2A25A4D2G3 310 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 PABPN1LA6NDY0 278 aaKnown RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 CYSRT1A8MQ03 144 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 MYO1CO00159 1063 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 SOCS6O14544 535 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 PSIP1O75475 530 aaKnown RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 SYF2O95926 243 aaKnown RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 HPP00738 406 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 ZGLP1P0C6A0 271 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 EZRP15311 586 aaKnown RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 FDXRP22570 491 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 HRH2P25021 359 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 ARNTP27540 789 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 MAGEA6P43360 314 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 PNLIPRP1P54315 467 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 RELAQ04206 551 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 MRPL49Q13405 166 aaKnown RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 KCNJ11Q14654 390 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 CCSMST1Q4G0I0 132 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 B3GNTL1Q67FW5 361 aaPredicted RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 FRMPD2BQ6IN97 320 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 LRRC8EQ6NSJ5 796 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 UGT3A1Q6NUS8 523 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 KIRREL2Q6UWL6 708 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 ISLR2Q6UXK2 745 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 ADCK2Q7Z695 626 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 KBTBD2Q8IY47 623 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 MCUQ8NE86 351 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 GRK7Q8WTQ7 553 aa13.09□□□□□ -0.31
GGA3-208ENST00000579743 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 ZNF669Q96BR6 464 aaPredicted RBP13.09□□□□□ -0.31
GGA3-208ENST00000579743 FAM136AQ96C01 138 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms