RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CENPKQ9BS16 269 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 SGPP1Q9BX95 441 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 KCNH6Q9H252 994 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 OR52A5Q9H2C5 316 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 ALG2Q9H553 416 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 NANOGQ9H9S0 305 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 PELI2Q9HAT8 420 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 SLC52A3Q9NQ40 469 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.78□□□□□ -0.68
SKA2-204ENST00000578519 MBD1Q9UIS9 605 aaPredicted RBP10.78□□□□□ -0.68
SKA2-204ENST00000578519 CNOT11Q9UKZ1 510 aaKnown RBP10.78□□□□□ -0.68
SKA2-204ENST00000578519 HCN2Q9UL51 889 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 WBP11Q9Y2W2 641 aaKnown RBP10.78□□□□□ -0.68
SKA2-204ENST00000578519 TMEM98Q9Y2Y6 226 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 PCDHA9Q9Y5H5 950 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 PIAS3Q9Y6X2 628 aa10.78□□□□□ -0.68
SKA2-204ENST00000578519 KIF26AQ9ULI4 1882 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 A0A1W2PQU0 124 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 TCRBV3S1A0A5B6 114 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 EVPLLA8MZ36 301 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 H0YJX3 145 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 MAN2B1O00754 1011 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 FPGTO14772 594 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 ANKRD28O15084 1053 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PAK4O96013 591 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 RPSAP08865 295 aaKnown RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 PPIBP23284 216 aaKnown RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 PTX3P26022 381 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 HTR1BP28222 390 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 NDUFS1P28331 727 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 HPCAL1P37235 193 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PIK3CBP42338 1070 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 SOX9P48436 509 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 TAS2R38P59533 333 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 CTBSQ01459 385 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 LIPEQ05469 1076 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 TSTA3Q13630 321 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 E2F2Q14209 437 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 ADGRE1Q14246 886 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 NFE2L1Q14494 772 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 KIAA0040Q15053 153 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PON2Q15165 354 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 IRF4Q15306 451 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 AAK1Q2M2I8 961 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 GRAMD1BQ3KR37 738 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 C6orf10Q5SRN2 563 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PRAMEF14Q5SWL7 426 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PRAMEF13Q5VWM6 474 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 NAIF1Q69YI7 327 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 NOXRED1Q6NXP6 359 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 IRGCQ6NXR0 463 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 NXPE4Q6UWF7 544 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 SLCO4C1Q6ZQN7 724 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 R3HCC1LQ7Z5L2 792 aaKnown RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 C17orf64Q86WR6 236 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PTRH1Q86Y79 214 aaKnown RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 SFTPA1Q8IWL2 248 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 NATD1Q8N6N6 113 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 TP53I13Q8NBR0 393 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 PLA2G15Q8NCC3 412 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 ST13P5Q8NFI4 369 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 OR5K2Q8NHB8 316 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 WDR20Q8TBZ3 569 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 FOXJ1Q92949 421 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 CXorf40BQ96DE9 158 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 FCRL1Q96LA6 429 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 QRFPRQ96P65 431 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 NR1H4Q96RI1 486 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 UHRF1Q96T88 793 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 AIF1LQ9BQI0 150 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 RPP25Q9BUL9 199 aaKnown RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 APOOQ9BUR5 198 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 ZDHHC5Q9C0B5 715 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 MVB12BQ9H7P6 319 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 FARSBQ9NSD9 589 aaKnown RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 ARMC1Q9NVT9 282 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 SPATA6Q9NWH7 488 aaPredicted RBP10.77□□□□□ -0.69
SKA2-204ENST00000578519 CMTM6Q9NX76 183 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 SIRT5Q9NXA8 310 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 MCM8Q9UJA3 840 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PPT2Q9UMR5 302 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 DTNAQ9Y4J8 743 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PCDHB3Q9Y5E6 796 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 MTCH2Q9Y6C9 303 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 COLEC10Q9Y6Z7 277 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 PLXNB3Q9ULL4 1909 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 C2orf16Q68DN1 1984 aa10.77□□□□□ -0.69
SKA2-204ENST00000578519 MUC22E2RYF6 1773 aaPredicted RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 A0A096LPI6 279 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 PRSS51A0A1B0GVH4 220 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 E7EQ34 232 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 NME4O00746 187 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 SORBS2O94875 1100 aaKnown RBP10.76□□□□□ -0.69
SKA2-204ENST00000578519 CCNDBP1O95273 360 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 APBB3O95704 486 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 NPPBP16860 134 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 IGFBP4P22692 258 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 HRH2P25021 359 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 IL12AP29459 219 aa10.76□□□□□ -0.69
SKA2-204ENST00000578519 NUDT1P36639 197 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms