RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	TSR3	Q9UJK0	312 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ADAMTS6	Q9UKP5	1117 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CLDN16	Q9Y5I7	305 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AP1M2	Q9Y6Q5	423 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LOC102723996	A0A087X1L8	192 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IGHV1-45	A0A0A0MS14	117 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IGHV3-20	A0A0C4DH32	117 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329		A0A0J9YVX5	310 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HYKK	A2RU49	373 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ERI2	A8K979	691 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TARM1	B6A8C7	271 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GFY	I3L273	518 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IFRD1	O00458	451 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HAT1	O14929	419 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LCMT2	O60294	686 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZG16	O60844	167 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	VPS4B	O75351	444 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	BANF1	O75531	89 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	VAPB	O95292	243 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SLC16A8	O95907	504 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TBX6	O95947	436 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	B3GALT4	O96024	378 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	F10	P00742	488 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IFNB1	P01574	187 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ALB	P02768	609 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FTH1	P02794	183 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	APRT	P07741	180 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TPM1	P09493	284 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZGLP1	P0C6A0	271 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR56A5	P0C7T3	313 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ITGAM	P11215	1152 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ALAS2	P22557	587 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IMPA1	P29218	277 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CDC25B	P30305	580 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FMO4	P31512	558 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	STIP1	P31948	543 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CXCR5	P32302	372 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FDFT1	P37268	417 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SLC26A3	P40879	764 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FOLR3	P41439	243 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SKIV2L2	P42285	1042 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TSFM	P43897	325 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ADAR	P55265	1226 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KCNK10	P57789	538 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	VSX2	P58304	361 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MAT1A	Q00266	395 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KRT33B	Q14525	404 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TRIP13	Q15645	432 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PHKG1	Q16816	387 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PCID2	Q5JVF3	399 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RNFT1	Q5M7Z0	435 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CCDC181	Q5TID7	509 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF468	Q5VIY5	522 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LRRC8B	Q6P9F7	803 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CNST	Q6PJW8	725 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TMEM205	Q6UW68	189 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TMEM207	Q6UWW9	146 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MBOAT1	Q6ZNC8	495 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF662	Q6ZS27	426 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LANCL3	Q6ZV70	420 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MAMDC2	Q7Z304	686 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ATCAY	Q86WG3	371 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RAB43	Q86YS6	212 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CILP2	Q8IUL8	1156 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	REXO1L1P	Q8IX06	675 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRSS58	Q8IYP2	241 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF295-AS1	Q8N0V1	137 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RNF10	Q8N5U6	811 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TTC13	Q8NBP0	860 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SPC24	Q8NBT2	197 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ACBD4	Q8NC06	268 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ST6GALNAC3	Q8NDV1	305 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR6P1	Q8NGX9	317 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CD200R1	Q8TD46	325 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PPP4R1	Q8TF05	950 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	COG1	Q8WTW3	980 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FAR1	Q8WVX9	515 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ASZ1	Q8WWH4	475 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ASB11	Q8WXH4	323 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SEC14L1	Q92503	715 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TM4SF19	Q96DZ7	209 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PWWP2A	Q96N64	755 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	OR4K3	Q96R72	315 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PLCD4	Q9BRC7	762 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DPH7	Q9BTV6	452 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ACAT2	Q9BWD1	397 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HES7	Q9BYE0	225 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SPNS1	Q9H2V7	528 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MRM3	Q9HC36	420 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LRRC4C	Q9HCJ2	640 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	LUC7L	Q9NQ29	371 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CATSPERZ	Q9NTU4	200 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GUCA1B	Q9UMX6	200 aa		4.23	□□□□□ -1.73
PPP4R1-209	ENST00000578329	VPS4A	Q9UN37	437 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms